RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 RENP00797 406 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 IGHMP01871 453 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SCG5P05408 212 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CTLA4P16410 223 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF17P17021 662 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NME2P22392 152 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ENPP1P22413 925 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MAGEA5P43359 124 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CD97P48960 835 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MEOX1P50221 254 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC25A1P53007 311 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SUCLG1P53597 346 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 BIDP55957 195 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CLDN15P56746 228 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SOX8P57073 446 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 RAC1P63000 192 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ARG2P78540 354 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZP4Q12836 540 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NFATC3Q12968 1075 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 GGTLC2Q14390 218 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MFSD13AQ14CX5 517 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 EEF1A1P5Q5VTE0 462 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 LIPKQ5VXJ0 399 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC25A25Q6KCM7 469 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF322Q6U7Q0 402 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 PLXDC2Q6UX71 529 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC35D2Q76EJ3 337 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 PXKQ7Z7A4 578 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 GGNQ86UU5 652 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PHC2Q8IXK0 858 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ASB10Q8WXI3 467 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TMEM203Q969S6 136 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TRMT61AQ96FX7 289 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 CNN2Q99439 309 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 TSC22D3Q99576 134 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CHCHD6Q9BRQ6 235 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CENPOQ9BU64 300 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TTTY12Q9BZ98 90 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 OR2B2Q9GZK3 357 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 RACGAP1Q9H0H5 632 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC6A15Q9H2J7 730 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CXorf56Q9H5V9 222 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 WDR76Q9H967 626 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 HAO2Q9NYQ3 351 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ING1Q9UK53 422 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZMIZ1Q9ULJ6 1067 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NPIPA1Q9UND3 350 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 WASF3Q9UPY6 502 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 POLHQ9Y253 713 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 B3GALT5Q9Y2C3 310 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 KLHDC2Q9Y2U9 406 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 HDGFL3Q9Y3E1 203 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SIRT4Q9Y6E7 314 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF407Q9C0G0 2248 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CFAP47Q6ZTR5 3102 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 IGLV1-36A0A0B4J1U3 117 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 A0A1W2PNV4 684 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 AQP7P3A6NL99 342 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF891A8MT65 544 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 PSMD9O00233 223 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CCRL2O00421 344 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TRAF3IP2O43734 574 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 AIREO43918 545 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 GPX5O75715 221 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MPZL1O95297 269 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PMS2P2O95744 297 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ITGB2P05107 769 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF16P17020 682 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 CENPAP49450 140 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CLK1P49759 484 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 GFRA1P56159 465 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 OR12D2P58182 307 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 RPS25P62851 125 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 H3F3AP84243 136 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PMP22Q01453 160 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 LGALS3BPQ08380 585 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MLLT11Q13015 90 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 TMED1Q13445 227 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 C1DQ13901 141 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 GALEQ14376 348 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 MEP1BQ16820 701 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TP53I3Q53FA7 332 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 RNFT1Q5M7Z0 435 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC35D3Q5M8T2 416 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 LCN1P1Q5VSP4 162 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 CARD17Q5XLA6 110 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TMEM225Q6GV28 225 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 C19orf48Q6RUI8 117 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 RPTNQ6XPR3 784 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PLEKHG7Q6ZR37 379 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ADCK1Q86TW2 530 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ERI1Q8IV48 349 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 UEVLDQ8IX04 471 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC35F2Q8IXU6 374 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TIGD4Q8IY51 512 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 KLHL36Q8N4N3 616 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms