RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ARPC3O15145 178 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ARSBP15848 533 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RBMS1P29558 406 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ABCA11PQ4W5N1 156 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM201Q5SNT2 666 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 OVCH1Q7RTY7 1134 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 LINC00346Q8IVM7 164 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 POGLUT1Q8NBL1 392 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 NPRL2Q8WTW4 380 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IP6K3Q96PC2 410 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SLIRPQ9GZT3 109 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF160Q9HCG1 818 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 VSX1Q9NZR4 365 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 MTRF1O75570 445 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 IL9P15248 144 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 RNF4P78317 190 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SCRN3Q0VDG4 424 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SRSF5Q13243 272 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 HLA-BQ31612 363 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 NDUFAF7Q7L592 441 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CHRDQ9H2X0 955 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 METTL8Q9H825 291 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PRAMEF27A3QJZ7 478 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM225BP0DP42 221 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 APOBEC1P41238 236 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SRYQ05066 204 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CBLN3Q6UW01 205 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 S100A7AQ86SG5 101 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 NUBP2Q9Y5Y2 271 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 RBMXP38159 391 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CDK5R1Q15078 307 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 H1FNTQ75WM6 255 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 OR11A1Q9GZK7 315 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MGAT4CQ9UBM8 478 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FER1L5A0AVI2 2057 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FOLR1P15328 257 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 RAB3AP20336 220 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PUDPQ08623 228 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SPOCK1Q08629 439 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 YOD1Q5VVQ6 348 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 BEST4Q8NFU0 473 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 OR1N1Q8NGS0 311 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 KCNE4Q8WWG9 221 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FOXRED1Q96CU9 486 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PDCD1LG2Q9BQ51 273 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 KCNIP3Q9Y2W7 256 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MAB21L2Q9Y586 359 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MEIS3P1A6NDR6 274 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MT-ND4P03905 459 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ELK1P19419 428 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 TGM4P49221 684 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 EMC4Q5J8M3 183 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 METTL11BQ5VVY1 283 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ESPNLQ6ZVH7 1005 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MRPL41Q8IXM3 137 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 TM4SF19Q96DZ7 209 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 S1PR5Q9H228 398 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 C20orf141Q9NUB4 165 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CTSFQ9UBX1 484 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 A0A0B4J2E0 115 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 A0A1B0GX12 115 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 NAP1L6A6NFF2 107 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 LIMS3P0CW19 117 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 LIMS4P0CW20 117 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 BIDP55957 195 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 LIN7BQ9HAP6 207 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 GPR160Q9UJ42 338 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PLXNA3P51805 1871 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 WDR90Q96KV7 1748 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 DNAJB6O75190 326 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 MPIG6BO95866 241 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 GIFP27352 417 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FGF9P31371 208 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 EMP3P54852 163 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 AWAT2Q6E213 333 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 INO80EQ8NBZ0 244 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SPTSSAQ969W0 71 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 OR14I1A6ND48 311 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ARPC1BO15143 372 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 AKR7A3O95154 331 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 EXT1Q16394 746 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 GAB4Q2WGN9 574 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 LRRC37A5PQ49AS3 106 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ORAI1Q96D31 301 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF701Q9NV72 531 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PILRAQ9UKJ1 303 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM212A6NML5 194 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 PLATP00750 562 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 LPLP06858 475 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FOXRED2Q8IWF2 684 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CARFQ8N187 725 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ANKRD9Q96BM1 317 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 SEMA4CQ9C0C4 833 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 DNAJB12Q9NXW2 375 aaKnown RBP5.74□□□□□ -1.49
PRKDC-202ENST00000338368 FBXL4Q9UKA2 621 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ZGRF1Q86YA3 2104 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 A0A0X1KG70 313 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 CIB4A0PJX0 185 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 GDNFP39905 211 aa5.74□□□□□ -1.49
PRKDC-202ENST00000338368 ETV6P41212 452 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms