RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PDSS1Q5T2R2 415 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 PXKQ7Z7A4 578 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 FJX1Q86VR8 437 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 LIX1LQ8IVB5 337 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 MUS81Q96NY9 551 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 GPX7Q96SL4 187 aaPredicted RBP14.64□□□□□ -0.07
SHOX-201ENST00000334060 RASSF1Q9NS23 344 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 PRSS50Q9UI38 385 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 PRRG2O14669 202 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 UPK3AO75631 287 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 TNFSF13O75888 250 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ZNF432O94892 652 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 RCBTB2O95199 551 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 STSP08842 583 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ATP6V1B1P15313 513 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ZNF43P17038 809 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 S100A1P23297 94 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 SLC6A6P31641 620 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ACVR1BP36896 505 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 KIR2DL2P43627 348 aaPredicted RBP14.63□□□□□ -0.07
SHOX-201ENST00000334060 CRMP1Q14194 572 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 GUSBP1Q15486 140 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 C12orf73Q69YU5 71 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 NIPAL3Q6P499 406 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 LNX2Q8N448 690 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 PACRGLQ8N7B6 248 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ADPRHL1Q8NDY3 354 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 OR52E2Q8NGJ4 325 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 OR51L1Q8NGJ5 315 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 OR9Q1Q8NGQ5 310 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 PRR7Q8TB68 274 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 CNBD2Q96M20 576 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 NAA11Q9BSU3 229 aaPredicted RBP14.63□□□□□ -0.07
SHOX-201ENST00000334060 TMEM165Q9HC07 324 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 FANCFQ9NPI8 374 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 TIGARQ9NQ88 270 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 ZNF226Q9NYT6 803 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 NDRG4Q9ULP0 352 aaKnown RBP14.63□□□□□ -0.07
SHOX-201ENST00000334060 ESPL1Q14674 2120 aa14.63□□□□□ -0.07
SHOX-201ENST00000334060 A0A0G2JNJ9 132 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 LOC100130705A0A1B0GUX0 176 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 HTR3EA5X5Y0 456 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 OR6C68A6NDL8 312 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 MBD3L4A6NDZ8 208 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 MBD3L3A6NE82 208 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 MBD3L5A6NJ08 208 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 FIGNL2A6NMB9 653 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 H3BSA7 217 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SEC14L2O76054 403 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 PRPS1P60891 318 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 C1DQ13901 141 aaKnown RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 MFSD13AQ14CX5 517 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SMN1Q16637 294 aaKnown RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 C9orf135Q5VTT2 229 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SLX4IPQ5VYV7 408 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 LAIR2Q6ISS4 152 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SLC27A4Q6P1M0 643 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 DPY19L2P2Q6ZN68 376 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 CNEP1R1Q8N9A8 125 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 OR2T33Q8NG76 320 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 MBD3L2Q8NHZ7 208 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 TFAP2CQ92754 450 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 ZHX1-C8orf76Q96EF9 292 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 ALKBH3Q96Q83 286 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 OR2M2Q96R28 347 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 RHNO1Q9BSD3 238 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 TXNIPQ9H3M7 391 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 Q9UFV3 132 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 RASD1Q9Y272 281 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SURF4O15260 269 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 ARHGEF9O43307 516 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 WDR1O75083 606 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 RAD23AP54725 363 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 KRR1Q13601 381 aaKnown RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 GPR141Q7Z602 305 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 TMEM123Q8N131 208 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 TCEANCQ8N8B7 351 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 MINDY2Q8NBR6 621 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 ANKK1Q8NFD2 765 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 OR52L1Q8NGH7 329 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 CNIH3Q8TBE1 160 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SMAP2Q8WU79 429 aaPredicted RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 APH1BQ8WW43 257 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 DDOQ99489 341 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 SYT4Q9H2B2 425 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 HINT3Q9NQE9 182 aaKnown RBP14.62□□□□□ -0.07
SHOX-201ENST00000334060 RNF6Q9Y252 685 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 ZNF175Q9Y473 711 aa14.62□□□□□ -0.07
SHOX-201ENST00000334060 IGKV3D-15A0A087WSY6 115 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 CD8B2A6NJW9 211 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 DNPH1O43598 174 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 BCL10O95999 233 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 PCSK6P29122 969 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 GGT2P36268 569 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 CA7P43166 264 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 SLC16A1P53985 500 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 RPL27P61353 136 aaKnown RBP14.61□□□□□ -0.07
SHOX-201ENST00000334060 TSPO2Q5TGU0 170 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 LEG1Q6P5S2 330 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms