RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CGGBP1Q9UFW8 167 aaPredicted RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 A0A087WV62 115 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 H0YIG0 161 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 RFPL3O75679 317 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 HRGP04196 525 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 AKR1C2P52895 323 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 H1FNTQ75WM6 255 aaPredicted RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 SYT13Q7L8C5 426 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 CAMKMTQ7Z624 323 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 YRDCQ86U90 279 aaKnown RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 SIAH3Q8IW03 269 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 OR51D1Q8NGF3 324 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 CMC2Q9NRP2 79 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 SLC33A1O00400 549 aaPredicted RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 TNFSF12O43508 249 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 ENPP1P22413 925 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 HTR4Q13639 388 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 ELP2Q6IA86 826 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 LCN10Q6JVE6 187 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 RDH10Q8IZV5 341 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 IL1F10Q8WWZ1 152 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 METTL12A8MUP2 240 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 FUCA1P04066 466 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 GLB1P16278 677 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 SPI1P17947 270 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 SLC36A2Q495M3 483 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 MICU1Q9BPX6 476 aa11.91□□□□□ -0.5
VSTM4-202ENST00000332853 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
VSTM4-202ENST00000332853 TAS2R19P59542 299 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 GABREP78334 506 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ZNF616Q08AN1 781 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 MESP2Q0VG99 397 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 POU4F3Q15319 338 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 YIF1BQ5BJH7 314 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 SLC35D3Q5M8T2 416 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 METAP1DQ6UB28 335 aaPredicted RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 OPALINQ96PE5 141 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 PIGQQ9BRB3 760 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 EMC7Q9NPA0 242 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 COQ3Q9NZJ6 369 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 OR52A1Q9UKL2 312 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 MOSPD3O75425 235 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 TP53P04637 393 aaPredicted RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 OR10A3P58181 314 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 RPL18Q07020 188 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 AQP6Q13520 282 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ZMYND11Q15326 602 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 EXOSC6Q5RKV6 272 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 THOC3Q96J01 351 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ING1Q9UK53 422 aaPredicted RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 DSCR3O14972 297 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 DLSTP36957 453 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 PPICP45877 212 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 CCL11P51671 97 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 MTCP1P56278 107 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 SRSF5Q13243 272 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 C5orf46Q6UWT4 87 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 UNQ6126/PRO20091Q6UXV3 157 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 SGPP2Q8IWX5 399 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 MIB2Q96AX9 1013 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ZG16BQ96DA0 208 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 DCLRE1CQ96SD1 692 aaKnown RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 CDCA4Q9BXL8 241 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 PLCXD1Q9NUJ7 323 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 CHRNA9Q9UGM1 479 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 IRF2P14316 349 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 CCL7P80098 99 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 LIPNQ5VXI9 398 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 GRAMD2AQ8IUY3 354 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 SNAPC3Q92966 411 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ZBTB8AQ96BR9 441 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 ITPKCQ96DU7 683 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 COX14Q96I36 57 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
VSTM4-202ENST00000332853 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 NDUFB11Q9NX14 153 aa11.9□□□□□ -0.5
VSTM4-202ENST00000332853 A0A0B4J203 849 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 SSX5O60225 188 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 HLA-AP01891 365 aaKnown RBP11.9□□□□□ -0.51
VSTM4-202ENST00000332853 FABP5Q01469 135 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 FZD2Q14332 565 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 SLC9A3R2Q15599 337 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 CCDC28AQ8IWP9 274 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms