RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FKBP14Q9NWM8 211 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 EMC3Q9P0I2 261 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 H2AFY2Q9P0M6 372 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SPTA1P02549 2419 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC35F4A4IF30 521 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC22A31A6NKX4 558 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 GPR171O14626 319 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 AQP8O94778 261 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PGA4P0DJD7 388 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PGA3P0DJD8 388 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SPI1P17947 270 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 ACSF3Q4G176 576 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PRR30Q53SZ7 412 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC35D3Q5M8T2 416 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PCSK4Q6UW60 755 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 OR2T4Q8NH00 348 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 KISS1RQ969F8 398 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC25A44Q96H78 314 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 OR2M2Q96R28 347 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 MRPL13Q9BYD1 178 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SYT4Q9H2B2 425 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 DUSP21Q9H596 190 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 AMBNQ9NP70 447 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PAK1IP1Q9NWT1 392 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 CNOT2Q9NZN8 540 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 WARS2Q9UGM6 360 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 BOD1L1Q8NFC6 3051 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF726A6NNF4 738 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF724A8MTY0 619 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 AHRRA9YTQ3 701 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNHIT1O43257 154 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CLUP10909 449 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CLRN1P58418 232 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC35A2P78381 396 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 SF3B4Q15427 424 aaKnown RBP eCLIP9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 KLHL12Q53G59 568 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 LCN1P1Q5VSP4 162 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 PLXDC2Q6UX71 529 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 TMEM123Q8N131 208 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF540Q8NDQ6 660 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 OR5M9Q8NGP3 310 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 GGHQ92820 318 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 NMD3Q96D46 503 aaKnown RBP9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CNTNAP3BQ96NU0 1288 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CNTNAP3Q9BZ76 1288 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 OR51V1Q9H2C8 321 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 BCO1Q9HAY6 547 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 GP6Q9HCN6 339 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CCNB1IP1Q9NPC3 277 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 MRPS18AQ9NVS2 196 aaKnown RBP9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 FKBP7Q9Y680 259 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ATRXP46100 2492 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 IRGMA1A4Y4 181 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF432O94892 652 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 GYPBP06028 91 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 NR2C1P13056 603 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CRABP1P29762 137 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 MTNR1AP48039 350 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 CAMK2DQ13557 499 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 LY6DQ14210 128 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 GTF2IRD2BQ6EKJ0 949 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 DNM1P34Q6PK57 102 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 AHSA2Q719I0 299 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 GTF2IRD2Q86UP8 949 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 MCEMP1Q8IX19 187 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 SYT14Q8NB59 555 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 FAM57AQ8TBR7 257 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 FNDC8Q8TC99 324 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 RNFT2Q96EX2 444 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 ASF1BQ9NVP2 202 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 MOKQ9UQ07 419 aa9.1□□□□□ -0.95
VIPAS39-201ENST00000327028 MRPS14O60783 128 aaKnown RBP9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 WDR1O75083 606 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 GLCEO94923 617 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TGM6O95932 706 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 EEF1B2P24534 225 aaKnown RBP9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 PTGER4P35408 488 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 GGTLC2Q14390 218 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 HIST3H3Q16695 136 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 KLHL22Q53GT1 634 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 CARD17Q5XLA6 110 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 P4HA3Q7Z4N8 544 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 ZBTB46Q86UZ6 589 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 OR6V1Q8N148 313 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 PROKR2Q8NFJ6 384 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SGCDQ92629 289 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 MYDGFQ969H8 173 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TMEM54Q969K7 222 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TSSK2Q96PF2 358 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TRIB1Q96RU8 372 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 TEAD3Q99594 435 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 COPS4Q9BT78 406 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 NUAK2Q9H093 628 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 RACGAP1Q9H0H5 632 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms