RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GKN3PP0CG01 181 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TMIGD3P0DMS9 266 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TFPIP10646 304 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 PRG2P13727 222 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF23P17027 643 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CD53P19397 219 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 PSMB1P20618 241 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CPT2P23786 658 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 MPGP29372 298 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 AGTR1P30556 359 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CAPGP40121 348 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CLDN15P56746 228 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 MRPS34P82930 218 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 EFNB1P98172 346 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 HSF1Q00613 529 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 RASGEF1BQ0VAM2 473 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 PIN1Q13526 163 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 KIR3DS1Q14943 382 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 GXYLT1Q4G148 440 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 RBM48Q5RL73 367 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 ZBTB49Q6ZSB9 765 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 Q6ZT83 130 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 USP51Q70EK9 711 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 KRT74Q7RTS7 529 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 COMTD1Q86VU5 262 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 NRMQ8IXM6 262 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 GPR137CQ8N3F9 429 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 AQP11Q8NBQ7 271 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 ICA1LQ8NDH6 482 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 OR1J2Q8NGS2 313 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TMEM255BQ8WV15 326 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TAAR8Q969N4 342 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 SH3YL1Q96HL8 342 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 RADILQ96JH8 1075 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF570Q96NI8 536 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 GNRHR2Q96P88 292 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TUBA1CQ9BQE3 449 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 MRPL13Q9BYD1 178 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 ANKRD60Q9BZ19 345 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 YIPF3Q9GZM5 350 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 QRSL1Q9H0R6 528 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC6A15Q9H2J7 730 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 OR52D1Q9H346 318 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 GSX1Q9H4S2 264 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 MCCC2Q9HCC0 563 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 KLHL1Q9NR64 748 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TBC1D23Q9NUY8 699 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 COQ3Q9NZJ6 369 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CGGBP1Q9UFW8 167 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 PROCRQ9UNN8 238 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 USP22Q9UPT9 525 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 CAMK2AQ9UQM7 478 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 SHANK1Q9Y566 2161 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 VCANP13611 3396 aa2.92□□□□□ -1.94
SCAMP1-201ENST00000320280 TEX13CA0A0J9YWL9 993 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 TRBV4-1A0A0J9YWV2 114 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 MS4A18H0YCH9 400 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 hCG_2039718K7EN88 272 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 EFNA2O43921 213 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 SEMA7AO75326 666 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 TP53P04637 393 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 CCDC159P0C7I6 412 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 PGA4P0DJD7 388 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 PGA3P0DJD8 388 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF26P17031 533 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 MYF6P23409 242 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 PTGER1P34995 402 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ARR3P36575 388 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 RFX3P48380 749 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 RGS6P49758 472 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 HIST1H3AP68431 136 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ADARB1P78563 741 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 BDH1Q02338 343 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 POU3F1Q03052 451 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 NPRL3Q12980 569 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FHL1Q13642 323 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 C1DQ13901 141 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 MS4A18Q3C1V0 323 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 TMEM176BQ3YBM2 270 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 KLHL22Q53GT1 634 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 HIST2H3PS2Q5TEC6 136 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF544Q6NX49 715 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ANKRD16Q6P6B7 361 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC25A47Q6Q0C1 308 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 KLHL17Q6TDP4 642 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 CASP12Q6UXS9 341 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 HIST2H3AQ71DI3 136 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 NUFIP2Q7Z417 695 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ZER1Q7Z7L7 766 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 JAZF1Q86VZ6 243 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 NKAIN4Q8IVV8 208 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FAM86B1Q8N7N1 296 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ATG16L2Q8NAA4 619 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 NPEPL1Q8NDH3 523 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 TMEM163Q8TC26 289 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 LRTOMTQ8WZ04 291 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 RNASE6Q93091 150 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms