RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMEM201Q5SNT2 666 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 VWA1Q6PCB0 445 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 USP51Q70EK9 711 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 CXXC5Q7LFL8 322 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 AAED1Q7RTV5 226 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC43A2Q8N370 569 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNRF4Q8WWF5 429 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 Q9H521 79 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 ASB6Q9NWX5 421 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 PRR23D1E9PI22 279 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ARPC3O15145 178 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 WDR1O75083 606 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 MRPL33O75394 65 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 IFNGP01579 166 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 HMGN1P05114 100 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PRR23D2P0DMB1 279 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 FCGR2AP12318 317 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 GABRA1P14867 456 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 AGTR1P30556 359 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PYCR1P32322 319 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 MAD2L1BPQ15013 274 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 NSUN5P2Q63ZY6 315 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 NPEPL1Q8NDH3 523 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 OR6N1Q8NGY5 312 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 TMEM163Q8TC26 289 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SMAP2Q8WU79 429 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 OR2M2Q96R28 347 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SF3B5Q9BWJ5 86 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PRRG3Q9BZD7 231 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 NUAK2Q9H093 628 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 TP63Q9H3D4 680 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PRSS37A4D1T9 235 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 E9PQ18 207 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 XPNPEP2O43895 674 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC16A7O60669 478 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ENTPD6O75354 484 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 YES1P07947 543 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ACADSP16219 412 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 MYF6P23409 242 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 POU4F3Q15319 338 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SHFQ7M4L6 423 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 DEPDC4Q8N2C3 294 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF786Q8N393 782 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ST6GALNAC3Q8NDV1 305 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SETD9Q8NE22 299 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 BPIFB6Q8NFQ5 453 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PRR7Q8TB68 274 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 PTP4A1Q93096 173 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF837Q96EG3 531 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC25A44Q96H78 314 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 FANCFQ9NPI8 374 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 EMC3Q9P0I2 261 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF175Q9Y473 711 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 LRRC42Q9Y546 428 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
PDLIM5-202ENST00000318007 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 UPK3AO75631 287 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 KRT33AO76009 404 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 IGHG1P01857 330 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 IGHMP01871 453 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 MRPL3P09001 348 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 CTLA4P16410 223 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 PDK3Q15120 406 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 GPR139Q6DWJ6 353 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 NHLRC1Q6VVB1 395 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 FJX1Q86VR8 437 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 OR6V1Q8N148 313 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 MARVELD2Q8N4S9 558 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 NOXO1Q8NFA2 376 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 PROKR2Q8NFJ6 384 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 OR8J1Q8NGP2 316 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 PRSS50Q9UI38 385 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
PDLIM5-202ENST00000318007 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 WBP4O75554 376 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 RENP00797 406 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 IL2RAP01589 272 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 PAICSP22234 425 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 RPS27P42677 84 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 CSNK1A1P48729 337 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 CDK5R2Q13319 367 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 APOFQ13790 326 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 TSPO2Q5TGU0 170 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GTF2IRD2BQ6EKJ0 949 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GTF2IRD2Q86UP8 949 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF100Q8IYN0 542 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 RHOXF1Q8NHV9 184 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 WNT2BQ93097 391 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 ZMYND19Q96E35 227 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GMPPAQ96IJ6 420 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms