RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ERN2Q76MJ5 926 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 PARGQ86W56 976 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 SECTM1Q8WVN6 248 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RAB8BQ92930 207 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR51B6Q9H340 312 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 UPB1Q9UBR1 384 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 B4E171 279 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 G3V3Q6 166 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 FAAHO00519 579 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF208O43345 1280 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 CDC40O60508 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 SLC25A14O95258 325 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 TIMP2P16035 220 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 PCGF2P35227 344 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 METAP1P53582 386 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 RAP1AP62834 184 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 COX20Q5RI15 118 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 BMP8AQ7Z5Y6 402 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 CLDN19Q8N6F1 224 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 RGP1Q92546 391 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 GTF2A1LQ9UNN4 478 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 A0A1W2PQF6 199 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 TCRBV21S2A2A0A5A6 115 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 TSPAN11A1L157 253 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 MAGEB4O15481 346 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ARL6IP5O75915 188 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR2F2O95006 317 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 DCNP07585 359 aaKnown RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 LIMS3P0CW19 117 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 LIMS4P0CW20 117 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 COL9A1P20849 921 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 DGKAP23743 735 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 GZMMP51124 257 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 EIF5AP63241 154 aaKnown RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR2F1Q13607 317 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 TMEM35AQ53FP2 167 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 TMEM255AQ5JRV8 349 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ACOT7LQ6ZUV0 252 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 SLC35F3Q8IY50 421 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF283Q8N7M2 679 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 XAGE5Q8WWM1 108 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ELF4Q99607 663 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF230Q9UIE0 474 aaPredicted RBP10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 RPH3ALQ9UNE2 315 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 SH2B3Q9UQQ2 575 aa10.71□□□□□ -0.69
LDLRAD3-201ENST00000315571 COL4A2P08572 1712 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 A0A0G2JN53 185 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 NPIPB9F8W1W9 429 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 IFNGR2P38484 337 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 CSNK1EP49674 416 aaKnown RBP10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 GGNBP1Q5YKI7 109 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 FAM180AQ6UWF9 173 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 LRRC18Q8N456 261 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 CPEB3Q8NE35 698 aaKnown RBP10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 FOXRED1Q96CU9 486 aaPredicted RBP10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 DDA1Q9BW61 102 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 SLC25A18Q9H1K4 315 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 ISG20L2Q9H9L3 353 aaKnown RBP10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 OR14J1Q9UGF5 321 aa10.71□□□□□ -0.7
LDLRAD3-201ENST00000315571 LDB2O43679 373 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 CLDN7O95471 211 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 MT-ND5P03915 603 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 BMP7P18075 431 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 MPGP29372 298 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 RPIAP49247 311 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 PRKAG1P54619 331 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 TAS2R41P59536 307 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 ZXDAP98168 799 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 C2orf68Q2NKX9 166 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 PXKQ7Z7A4 578 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 BAP18Q8IXM2 172 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 KDM8Q8N371 416 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 OR13C5Q8NGS8 318 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 DVL3Q92997 716 aaPredicted RBP10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 DTD2Q96FN9 168 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 IP6K3Q96PC2 410 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 CRLS1Q9UJA2 301 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 KPTNQ9Y664 436 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 CCDC88CQ9P219 2028 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 TRBV5-3A0A0A0MS03 114 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 A0A1W2PP55 124 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 ACTA2P62736 377 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 ACTG2P63267 376 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 ACTC1P68032 377 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 ACTA1P68133 377 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 OR5I1Q13606 314 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 SLBPQ14493 270 aaKnown RBP eCLIP10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 PSAPL1Q6NUJ1 521 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 SSX7Q7RTT5 188 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 EXTL1Q92935 676 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 VOPP1Q96AW1 172 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 PACRGQ96M98 296 aaPredicted RBP10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 UBQLN3Q9H347 655 aa10.7□□□□□ -0.7
LDLRAD3-201ENST00000315571 MMP26Q9NRE1 261 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms