RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ACVR1BP36896 505 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 FAPQ12884 760 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 CAMK2DQ13557 499 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 THEM4Q5T1C6 240 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 STAC2Q6ZMT1 411 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 FAM122BQ7Z309 247 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 LSRQ86X29 649 aaPredicted RBP15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 CCDC36Q8IYA8 594 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 ACBD4Q8NC06 268 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 NOXO1Q8NFA2 376 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 OR2T33Q8NG76 320 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF519Q8TB69 540 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 TMEM54Q969K7 222 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 TSPAN32Q96QS1 320 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 RBP7Q96R05 134 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 PKP2Q99959 881 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 NIPSNAP1Q9BPW8 284 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 C9orf16Q9BUW7 83 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 EMC6Q9BV81 110 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 IFT27Q9BW83 186 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 MRPL13Q9BYD1 178 aaKnown RBP15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 ULBP2Q9BZM5 246 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 C8orf4Q9NR00 106 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 TBC1D23Q9NUY8 699 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF346Q9UL40 294 aaKnown RBP15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 OAZ3Q9UMX2 235 aa15.79■□□□□ 0.12
SSSCA1-201ENST00000309328 TUBAL3A6NHL2 446 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 H0YHG0 523 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 GOSR1O95249 250 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 HOXB1P14653 301 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 CDH2P19022 906 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 HOXC12P31275 282 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 FXYD6P3P58550 94 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 ESRRGP62508 458 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 ERVK-25P63136 954 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 TOP3AQ13472 1001 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 MELKQ14680 651 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 HIST3H3Q16695 136 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 NRN1LQ496H8 165 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 KLHL17Q6TDP4 642 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 THSD4Q6ZMP0 1018 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 BHLHA15Q7RTS1 189 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 CXorf67Q86X51 503 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 ICA1LQ8NDH6 482 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 MAGEE2Q8TD90 523 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 SAMD8Q96LT4 415 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 ALKBH3Q96Q83 286 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 KCNK17Q96T54 332 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 SEMA6AQ9H2E6 1030 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 DCLRE1BQ9H816 532 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 OBP2BQ9NPH6 170 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 NPDC1Q9NQX5 325 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 ORC6Q9Y5N6 252 aa15.78■□□□□ 0.12
SSSCA1-201ENST00000309328 CIB4A0PJX0 185 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ANKRD65E5RJM6 399 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 H3BN98 237 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 UPK3AO75631 287 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 TRMUO75648 421 aaKnown RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 CLDN1O95832 211 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 IFNGP01579 166 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 IGHV3-9P01782 118 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF26P17031 533 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 IGHV1-2P23083 117 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF133P52736 654 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ROR2Q01974 943 aaKnown RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 FAM27E3Q08E93 113 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 KRR1Q13601 381 aaKnown RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 TIMM23BQ5SRD1 257 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 CARD17Q5XLA6 110 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 KDM4DQ6B0I6 523 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 SLC27A4Q6P1M0 643 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 IGFN1Q86VF2 1251 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 DMRTC2Q8IXT2 367 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 LNX2Q8N448 690 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF433Q8N7K0 673 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 HSD17B8Q92506 261 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 DACH2Q96NX9 599 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ERMAPQ96PL5 475 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 PRRG3Q9BZD7 231 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 CRLF2Q9HC73 371 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 GPR35Q9HC97 309 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 KRT84Q9NSB2 600 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 ADAM18Q9Y3Q7 739 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 IER3IP1Q9Y5U9 82 aa15.77■□□□□ 0.12
SSSCA1-201ENST00000309328 USP9YO00507 2555 aaPredicted RBP15.77■□□□□ 0.11
SSSCA1-201ENST00000309328 SPTAN1Q13813 2472 aaKnown RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 PRSS37A4D1T9 235 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF99A8MXY4 864 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 M0R3G1 203 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 BAG2O95816 211 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 PRKACGP22612 351 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 IGFBP5P24593 272 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 EDNRAP25101 427 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 GUCA1AP43080 201 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF84P51523 738 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ELF3P78545 371 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 PPP2R2BQ00005 443 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 CD47Q08722 323 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC36A3Q495N2 470 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 C10orf128Q5T292 105 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms