RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MAP2K3P46734 347 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 PITPNBP48739 271 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 FOXL2P58012 376 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 MLF1P58340 268 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
PTPRE-202ENST00000306042 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 PGAP1Q75T13 922 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 OR52N5Q8NH56 324 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 ABHD4Q8TB40 342 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 C4orf36Q96KX1 117 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 LRFN5Q96NI6 719 aa8.41□□□□□ -1.06
PTPRE-202ENST00000306042 FCER2P06734 321 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 CD59P13987 128 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 CHRFAM7AQ494W8 412 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 KCTD21Q4G0X4 260 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 ANKRD34AQ69YU3 496 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
PTPRE-202ENST00000306042 ARIH2OSQ8N7S6 290 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 MFSD8Q8NHS3 518 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 MIB2Q96AX9 1013 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 COG8Q96MW5 612 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 SLC29A1Q99808 456 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 PILRAQ9UKJ1 303 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 MIA3Q5JRA6 1907 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 CCL21O00585 134 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 AGFG1P52594 562 aaKnown RBP8.4□□□□□ -1.06
PTPRE-202ENST00000306042 SLC37A1P57057 533 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 TUBA4AP68366 448 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 TUBA3CQ13748 450 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 RGS21Q2M5E4 152 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 PGBD2Q6P3X8 592 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 RIMKLAQ8IXN7 391 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 OR10D3Q8NH80 312 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 GPATCH2Q9NW75 528 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 ABRACLQ9P1F3 81 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 REV1Q9UBZ9 1251 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 PCDHGA3Q9Y5H0 932 aa8.4□□□□□ -1.06
PTPRE-202ENST00000306042 CRTAPO75718 401 aaPredicted RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 UCHL1P09936 223 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 FBXO45P0C2W1 286 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 ERGP11308 486 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 MAKP20794 623 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 CD97P48960 835 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 TUBA1BP68363 451 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 ARL6IP1Q15041 203 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 LYPD8Q6UX82 237 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 TUBA1AQ71U36 451 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 SAMD12Q8N8I0 201 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 SLC37A3Q8NCC5 494 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 GCDHQ92947 438 aaPredicted RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 IKZF5Q9H5V7 419 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 MEPEQ9NQ76 525 aaPredicted RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 OR14J1Q9UGF5 321 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 PATJQ8NI35 1801 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 SNPHO15079 494 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 ACTL6AO96019 429 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 CCL3P10147 92 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 GRB2P62993 217 aaKnown RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 CDK5R2Q13319 367 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 CD163Q86VB7 1156 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 GPR119Q8TDV5 335 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 SARGQ9BW04 601 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF346Q9UL40 294 aaKnown RBP8.4□□□□□ -1.07
PTPRE-202ENST00000306042 OSGIN2Q9Y236 505 aa8.4□□□□□ -1.07
PTPRE-202ENST00000306042 LOC101059948A0A1B0GTJ6 334 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CASP3P42574 277 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 FUT7Q11130 342 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF782Q6ZMW2 699 aaPredicted RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 PRSS48Q7RTY5 328 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 DCXRQ7Z4W1 244 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 LRRC17Q8N6Y2 441 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 IL17RDQ8NFM7 739 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 OR2M7Q8NG81 312 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ALKBH3Q96Q83 286 aaPredicted RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CD300AQ9UGN4 299 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 MUC6Q6W4X9 2439 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 IGKV1-8A0A0C4DH67 115 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 PRR19A6NJB7 356 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 MPIG6BO95866 241 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 OR2T7P0C7T2 308 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SDHAP31040 664 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CD96P40200 585 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 GABARAPL2P60520 117 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 EMC4Q5J8M3 183 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 OR2T27Q8NH04 317 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 LMF1Q96S06 567 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 EMC7Q9NPA0 242 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 C14orf166Q9Y224 244 aaKnown RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 HS3ST3B1Q9Y662 390 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 IGHV1-45A0A0A0MS14 117 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 DHHO43323 396 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms