RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PARPBPQ9NWS1 579 aa24.02■■□□□ 1.43
HDAC3-201ENST00000305264 NCOA6Q14686 2063 aaPredicted RBP24.01■■□□□ 1.43
HDAC3-201ENST00000305264 MYO18BQ8IUG5 2567 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 H0YJX3 145 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 IGHV3-9P01782 118 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 CDKN2AP42771 156 aaKnown RBP24.01■■□□□ 1.43
HDAC3-201ENST00000305264 ZNF362Q5T0B9 420 aaPredicted RBP24.01■■□□□ 1.43
HDAC3-201ENST00000305264 HDDC2Q7Z4H3 204 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 NOXO1Q8NFA2 376 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 OR52E2Q8NGJ4 325 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 APH1AQ96BI3 265 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 KCNK17Q96T54 332 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 NMNAT3Q96T66 252 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 PITX2Q99697 317 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 MRPL13Q9BYD1 178 aaKnown RBP24.01■■□□□ 1.43
HDAC3-201ENST00000305264 TVP23BQ9NYZ1 205 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 NDRG4Q9ULP0 352 aaKnown RBP24.01■■□□□ 1.43
HDAC3-201ENST00000305264 RNF6Q9Y252 685 aa24.01■■□□□ 1.43
HDAC3-201ENST00000305264 A6NIZ1 184 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 XKRYO14609 159 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 SURF4O15260 269 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 IGHG1P01857 330 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 RAP1BP61224 184 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 RAP1AP62834 184 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 KHDRBS1Q07666 443 aaKnown RBP eCLIP24■■□□□ 1.43
HDAC3-201ENST00000305264 DBPQ10586 325 aaPredicted RBP24■■□□□ 1.43
HDAC3-201ENST00000305264 ZNF100Q8IYN0 542 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 CMC2Q9NRP2 79 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 FOXD3Q9UJU5 478 aaPredicted RBP24■■□□□ 1.43
HDAC3-201ENST00000305264 LOC100130705A0A1B0GUX0 176 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 SLC43A1O75387 559 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 BMP5P22003 454 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 OR3A2P47893 321 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 PHYHD1Q5SRE7 291 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 TSPO2Q5TGU0 170 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 TFAP2EQ6VUC0 442 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 ADCK1Q86TW2 530 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 JAZF1Q86VZ6 243 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 DHRSXQ8N5I4 330 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 PRSS50Q9UI38 385 aa24■■□□□ 1.43
HDAC3-201ENST00000305264 SLC16A6O15403 523 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 CGAP01215 116 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 GGT2P36268 569 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 ADARB1P78563 741 aaKnown RBP23.99■■□□□ 1.43
HDAC3-201ENST00000305264 LEG1Q6P5S2 330 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 LIX1LQ8IVB5 337 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 CYB561A3Q8NBI2 242 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 ZNF555Q8NEP9 628 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 ALKBH3Q96Q83 286 aaPredicted RBP23.99■■□□□ 1.43
HDAC3-201ENST00000305264 SLCO5A1Q9H2Y9 848 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 GPR52Q9Y2T5 361 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 GMPPBQ9Y5P6 360 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 FLNCQ14315 2725 aa23.99■■□□□ 1.43
HDAC3-201ENST00000305264 PRSS37A4D1T9 235 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 UPK3AO75631 287 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 CLIC3O95833 236 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 HMGN1P05114 100 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 CSNK1A1P48729 337 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 CLRN1P58418 232 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 FMODQ06828 376 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 CD47Q08722 323 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 CRMP1Q14194 572 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SNAPC1Q16533 368 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 C6orf52Q5T4I8 152 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 C20orf196Q8IYI0 205 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SLC37A3Q8NCC5 494 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 FAM81AQ8TBF8 368 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 TEX12Q9BXU0 123 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SLC7A10Q9NS82 523 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 UBR5O95071 2799 aaPredicted RBP23.98■■□□□ 1.43
HDAC3-201ENST00000305264 RIIAD1A6NNX1 92 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SMNDC1O75940 238 aaKnown RBP eCLIP23.98■■□□□ 1.43
HDAC3-201ENST00000305264 OPRM1P35372 400 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 NPEPL1Q8NDH3 523 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 OR6N1Q8NGY5 312 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SLC38A2Q96QD8 506 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 OPN3Q9H1Y3 402 aaPredicted RBP23.98■■□□□ 1.43
HDAC3-201ENST00000305264 SYT4Q9H2B2 425 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 FN3KQ9H479 309 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 ZNF629Q9UEG4 869 aaPredicted RBP23.98■■□□□ 1.43
HDAC3-201ENST00000305264 KLHL21Q9UJP4 597 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 PROCRQ9UNN8 238 aa23.98■■□□□ 1.43
HDAC3-201ENST00000305264 OR6C68A6NDL8 312 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 PRKYO43930 277 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 IL18BPO95998 194 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 CAPGP40121 348 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 LINGO2Q7L985 606 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 TMEM54Q969K7 222 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 DDOQ99489 341 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 ALG12Q9BV10 488 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 PLSCR4Q9NRQ2 329 aa23.97■■□□□ 1.43
HDAC3-201ENST00000305264 VSX1Q9NZR4 365 aaPredicted RBP23.97■■□□□ 1.43
HDAC3-201ENST00000305264 SLC22A23A1A5C7 686 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 M0R3G1 203 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 IFNGP01579 166 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 ZNF3P17036 446 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 KEAP1Q14145 624 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 HIST3H3Q16695 136 aa23.96■■□□□ 1.43
HDAC3-201ENST00000305264 RELL2Q8NC24 303 aaPredicted RBP23.96■■□□□ 1.43
HDAC3-201ENST00000305264 TFAP2CQ92754 450 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms