RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 KTI12Q96EK9 354 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 SIGLEC11Q96RL6 698 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 PKP2Q99959 881 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TUBG2Q9NRH3 451 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 GIMAP2Q9UG22 337 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 NPTNQ9Y639 398 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 NUP214P35658 2090 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 CFLARO15519 480 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 PEX11AO75192 247 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 RGS9O75916 674 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 ALX3O95076 343 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 PTHP01270 115 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 SELEP16581 610 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 CASQ1P31415 396 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 RAD52P43351 418 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 RAB1AP62820 205 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 NPRL3Q12980 569 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 CDK5R2Q13319 367 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 CAMK2DQ13557 499 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 HLXQ14774 488 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 GPAT3Q53EU6 434 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TNFAIP8L2Q6P589 184 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TMEM154Q6P9G4 183 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 LRRN1Q6UXK5 716 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 MSANTD1Q6ZTZ1 278 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 USP51Q70EK9 711 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TREML1Q86YW5 311 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 SLC22A24Q8N4F4 322 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 OR6X1Q8NH79 312 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 VANGL1Q8TAA9 524 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 RAB8BQ92930 207 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TMEM43Q9BTV4 400 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 C1orf50Q9BV19 199 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 NARFLQ9H6Q4 476 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 TMEM38BQ9NVV0 291 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 MARCOQ9UEW3 520 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 IFT52Q9Y366 437 aa5.45□□□□□ -1.54
ITGB1-201ENST00000302278 DYNC2H1Q8NCM8 4307 aaKnown RBP5.45□□□□□ -1.54
ITGB1-201ENST00000302278 A0A0G2JPF8 293 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SH3PXD2BA1X283 911 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 HNRNPCL2B2RXH8 293 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 HNRNPCL3B7ZW38 293 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 HNRNPCL1O60812 293 aaKnown RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 CLPTM1O96005 669 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 TSPAN19P0C672 248 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 HNRNPCL4P0DMR1 293 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 IL7RP16871 459 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 CCNA2P20248 432 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PROK1P58294 105 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 RELBQ01201 579 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 MVKQ03426 396 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 BNIP2Q12982 314 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SWT1Q5T5J6 900 aaKnown RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 AVPI1Q5T686 147 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 LDLRAD3Q86YD5 345 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SKA3Q8IX90 412 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PAQR4Q8N4S7 273 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SPICQ8N5J4 248 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SLC30A7Q8NEW0 376 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 OR52P1PQ8NH57 321 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SNX33Q8WV41 574 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 MARS2Q96GW9 593 aaKnown RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 C1QTNF5Q9BXJ0 243 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SAP30LQ9HAJ7 183 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SEC14L4Q9UDX3 406 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PYCARDQ9ULZ3 195 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 A0A087WUJ7 227 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 A0A1W2PPW3 197 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 M0R082 166 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PTDSS1P48651 473 aaKnown RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 UCP2P55851 309 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 RAG2P55895 527 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 ZNF813Q6ZN06 617 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 FGFBP3Q8TAT2 258 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 ZNF417Q8TAU3 575 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 MGARPQ8TDB4 240 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 DNAJA3Q96EY1 480 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 APOPT1Q96IL0 206 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 ZNF587Q96SQ5 575 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 P2RX2Q9UBL9 471 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 C1QCP02747 245 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PRG2P13727 222 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PRKAR1BP31321 381 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 LSP1P33241 339 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 SELENOVP59797 346 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 RAB39AQ14964 217 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 C10orf128Q5T292 105 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 GKAP1Q5VSY0 366 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 DHRS4L2Q6PKH6 230 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 WDR88Q6ZMY6 472 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 FOXL2NBQ6ZUU3 175 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 UEVLDQ8IX04 471 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 PARP8Q8N3A8 854 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 TRIML2Q8N7C3 387 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 POU5F2Q8N7G0 328 aa5.44□□□□□ -1.54
ITGB1-201ENST00000302278 DNAJA4Q8WW22 397 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-201ENST00000302278 MRI1Q9BV20 369 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms