RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FRRS1LQ9P0K9 344 aa9.91□□□□□ -0.82
ZNF558-201ENST00000301475 NOSIPQ9Y314 301 aaKnown RBP9.91□□□□□ -0.82
ZNF558-201ENST00000301475 REV3LO60673 3130 aa9.91□□□□□ -0.82
ZNF558-201ENST00000301475 F5H0A9 414 aaPredicted RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 FGF16O43320 207 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 UPK3AO75631 287 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 WNT11O96014 354 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 SLC25A4P12235 298 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 CAPZA1P52907 286 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 DPTQ07507 201 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 HABP2Q14520 560 aaPredicted RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 FNDC3BQ53EP0 1204 aaKnown RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ATPAF1Q5TC12 328 aaPredicted RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF600Q6ZNG1 722 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ACOT7LQ6ZUV0 252 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 NDUFAF7Q7L592 441 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 GABRG1Q8N1C3 465 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 RASD2Q96D21 266 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 TRBV5-5A0A0J9YX44 114 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 CPED1A4D0V7 1026 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 LDB3O75112 727 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ALOX12BO75342 701 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 AGR2O95994 175 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 SLC35G4P0C7Q5 338 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 CSF2RAP15509 400 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 NR0B1P51843 470 aaKnown RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 BTN3A2P78410 334 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ID2Q02363 134 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 OR7A5Q15622 319 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 FAM109BQ6ICB4 259 aaPredicted RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 FAM122BQ7Z309 247 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF227Q86WZ6 799 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 OR6S1Q8NH40 331 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 PAQR8Q8TEZ7 354 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 CCDC107Q8WV48 283 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 PDCD10Q9BUL8 212 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 MRPS30Q9NP92 439 aaKnown RBP9.9□□□□□ -0.82
ZNF558-201ENST00000301475 ACKR4Q9NPB9 350 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
ZNF558-201ENST00000301475 TMEM72A0PK05 275 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 ICOSLGO75144 302 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 NDUFB2O95178 105 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 MELTFP08582 738 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 SMIM6P0DI80 62 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 POU3F4P49335 361 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 LINC01590Q5TEZ4 76 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 LIN54Q6MZP7 749 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 C3orf33Q6P1S2 294 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 ENPP7Q6UWV6 458 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 OR5AK2Q8NH90 309 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 COX14Q96I36 57 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 INSM2Q96T92 566 aaPredicted RBP9.9□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM74BQ9NUR3 256 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 MRM2Q9UI43 246 aaKnown RBP9.9□□□□□ -0.83
ZNF558-201ENST00000301475 ENTPD2Q9Y5L3 495 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 HEATR5AQ86XA9 2040 aa9.9□□□□□ -0.83
ZNF558-201ENST00000301475 SPTBN5Q9NRC6 3674 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 OR2AT4A6NND4 320 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 TGM5O43548 720 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 DNAJB6O75190 326 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ITGA5P08648 1049 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 FBXO45P0C2W1 286 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF806P0C7X5 589 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 PRSS3P35030 304 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 RAB28P51157 221 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 DEFB103AP81534 67 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 SRSF4Q08170 494 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 MESP2Q0VG99 397 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ALKBH1Q13686 389 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ODF4Q2M2E3 257 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 GPX8Q8TED1 209 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 EDAQ92838 391 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM106AQ96A25 262 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 TSSK2Q96PF2 358 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 MYADMQ96S97 322 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 BCL2L14Q9BZR8 327 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM27Q9HBJ8 222 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 C14orf105Q9NVL8 296 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 NOP16Q9Y3C1 178 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 SCAMP1O15126 338 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 EIF1BO60739 113 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 SNAPINO95295 136 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ABOP16442 354 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 CD34P28906 385 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 PEBP1P30086 187 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 EIF1P41567 113 aaKnown RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 IRF4Q15306 451 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 INPP5JQ15735 1006 aaPredicted RBP9.89□□□□□ -0.83
ZNF558-201ENST00000301475 VWA2Q5GFL6 755 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ANKRD33Q7Z3H0 272 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF614Q8N883 585 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 COX18Q8N8Q8 333 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 OR1J4Q8NGS1 313 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF251Q9BRH9 671 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 COMMD9Q9P000 198 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms