RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FAM122BQ7Z309 247 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 P4HA3Q7Z4N8 544 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 NANOGNBQ7Z5D8 188 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 GPAT4Q86UL3 456 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 IGFN1Q86VF2 1251 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TMEM123Q8N131 208 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 SLC43A2Q8N370 569 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 C10orf53Q8N6V4 93 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 AQP11Q8NBQ7 271 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 OR10G2Q8NGC3 310 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 OR51A7Q8NH64 312 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 ZNF519Q8TB69 540 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 GIPC3Q8TF64 312 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 RND1Q92730 232 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TMEM45BQ96B21 275 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 CENPNQ96H22 339 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 ZFP3Q96NJ6 502 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 OXGR1Q96P68 337 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TSPAN32Q96QS1 320 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 FEVQ99581 238 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 NAA11Q9BSU3 229 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 TAPBPLQ9BX59 468 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 UCK2Q9BZX2 261 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 KLHL4Q9C0H6 718 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 GABARAPL1Q9H0R8 117 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 OPN3Q9H1Y3 402 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 EGLN3Q9H6Z9 239 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 REEP1Q9H902 201 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 SMURF2Q9HAU4 748 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TIGARQ9NQ88 270 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 MED29Q9NX70 200 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 PDP1Q9P0J1 537 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 IL20RAQ9UHF4 553 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 PRSS50Q9UI38 385 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TMEFF2Q9UIK5 374 aaPredicted RBP5.21□□□□□ -1.58
SSX3-201ENST00000298396 OAZ3Q9UMX2 235 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 RASD1Q9Y272 281 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 TMEM5Q9Y2B1 443 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 B3GALT5Q9Y2C3 310 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 ADAM18Q9Y3Q7 739 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 ARFGEF3Q5TH69 2177 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 SPG11Q96JI7 2443 aa5.21□□□□□ -1.58
SSX3-201ENST00000298396 LRBAP50851 2863 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 IGKV1D-43A0A0B4J1Z2 117 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 SCO2A0A1W2PP80 73 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 FAM90A27PA6NNH2 459 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 HSPB2A8KAH6 182 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 BLOC1S5-TXNDC5H3BN57 136 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 DLGAP1O14490 977 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 SOCS2O14508 198 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 RRP9O43818 475 aaKnown RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 SOX14O95416 240 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CLDN1O95832 211 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 IGHV3-9P01782 118 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 IGHMP01871 453 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CRHP06850 196 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 RNASE1P07998 156 aaKnown RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 SAGP10523 405 aaPredicted RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 IFNGR1P15260 489 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 HOXB6P17509 224 aaKnown RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 BMP5P22003 454 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 FASP25445 335 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 EPHA2P29317 976 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 IFNA8P32881 189 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OPRM1P35372 400 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 GDNFP39905 211 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OR3A2P47893 321 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 SLC9A3P48764 834 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CASP6P55212 293 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CLDN17P56750 224 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 POU3F1Q03052 451 aaPredicted RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 GK3PQ14409 553 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 MFSD13AQ14CX5 517 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 RCN1Q15293 331 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 SF3B4Q15427 424 aaKnown RBP eCLIP5.2□□□□□ -1.582e-9■■■■■ 43.2
SSX3-201ENST00000298396 HSPB2Q16082 182 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 ACKR1Q16570 336 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 ARMC4Q5T2S8 1044 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 EEF1A1P5Q5VTE0 462 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 KDM4DQ6B0I6 523 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OR2A2Q6IF42 318 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CD300LDQ6UXZ3 194 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 PTCHD4Q6ZW05 846 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 SLC35D2Q76EJ3 337 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 PXKQ7Z7A4 578 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 MRGPRGQ86SM5 289 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OAFQ86UD1 273 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 PQLC1Q8N2U9 271 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 ZNF808Q8N4W9 903 aaPredicted RBP5.2□□□□□ -1.58
SSX3-201ENST00000298396 CLDN22Q8N7P3 220 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 CNEP1R1Q8N9A8 125 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 ZNF610Q8N9Z0 462 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 ACBD4Q8NC06 268 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OR6K3Q8NGY3 331 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OR4Q3Q8NH05 313 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 OR5K1Q8NHB7 308 aa5.2□□□□□ -1.58
SSX3-201ENST00000298396 LILRB4Q8NHJ6 448 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms