RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 EIF1P41567 113 aaKnown RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 GPR50Q13585 617 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 CD200R1LQ6Q8B3 271 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF519Q8TB69 540 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 CDADC1Q9BWV3 514 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 RERGLQ9H628 205 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ZMIZ1Q9ULJ6 1067 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 J3QLW9 94 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 TRIM3O75382 744 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF19P17023 458 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 HCCSP53701 268 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 TAS2R43P59537 309 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ACTA2P62736 377 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ACTG2P63267 376 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 FABP5Q01469 135 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 PUDPQ08623 228 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 C22orf42Q6IC83 251 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 H1FNTQ75WM6 255 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 RAB43Q86YS6 212 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ZBTB8AQ96BR9 441 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 SGCZQ96LD1 299 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 COQ7Q99807 217 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 TMED9Q9BVK6 235 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 PROK2Q9HC23 129 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ALKBH4Q9NXW9 302 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 PCNX2A6NKB5 2137 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 A0A087WZY1 265 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 A0A1W2PRG6 482 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 LIPT2A6NK58 231 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 CLDN25C9JDP6 229 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ADH6P28332 368 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 FGF9P31371 208 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 OR12D2P58182 307 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ZP4Q12836 540 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF468Q5VIY5 522 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 LYPD4Q6UWN0 246 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF248Q8NDW4 579 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 SNX18Q96RF0 628 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 SYT4Q9H2B2 425 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.36
C9orf3-202ENST00000297979 CHST11Q9NPF2 352 aa12.83□□□□□ -0.36
C9orf3-202ENST00000297979 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 LOC101059948A0A1B0GTJ6 334 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 DCTN6O00399 190 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 HLA-DPB1P04440 258 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 GLAP06280 429 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 SELENBP1Q13228 472 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 EEF1A1P5Q5VTE0 462 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 CROCCP3Q8IVE0 287 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 PM20D2Q8IYS1 436 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 OR6V1Q8N148 313 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 OR5M1Q8NGP8 315 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 SLC25A43Q8WUT9 341 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 KCTD7Q96MP8 289 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 WDR12Q9GZL7 423 aaKnown RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 C6orf62Q9GZU0 229 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 PPP1R14DQ9NXH3 145 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 GSTK1Q9Y2Q3 226 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 MRPS18BQ9Y676 258 aaKnown RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 SIRT4Q9Y6E7 314 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 OTOGLQ3ZCN5 2332 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 FZD7O75084 574 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 FTH1P19P0C7X4 201 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 LIFP15018 202 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 RPS19P39019 145 aaKnown RBP12.82□□□□□ -0.36
C9orf3-202ENST00000297979 HSF2Q03933 536 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 TLE3Q04726 772 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 MYBPHQ13203 477 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 ATP1A4Q13733 1029 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF846Q147U1 533 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF511Q8NB15 262 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 OR1J4Q8NGS1 313 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 COPS3Q9UNS2 423 aa12.82□□□□□ -0.36
C9orf3-202ENST00000297979 PRSS37A4D1T9 235 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 G3V3Y1 287 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 MS4A18H0YCH9 400 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 MS4A18Q3C1V0 323 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 SNX33Q8WV41 574 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 THAP4Q8WY91 577 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 TMEM41AQ96HV5 264 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 TMEM185BQ9H7F4 350 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms