RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 POLHQ9Y253 713 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 DAPL1A0PJW8 107 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 MS4A18H0YCH9 400 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 SERPINI2O75830 405 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 SPNP16150 400 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 AHCYP23526 432 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 UGT2B10P36537 528 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 OR3A3P47888 321 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 PUDPQ08623 228 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 MYBPHQ13203 477 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 TGIF1Q15583 401 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 MS4A18Q3C1V0 323 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 ASCL5Q7RTU5 278 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 LYSMD2Q8IV50 215 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 GHDCQ8N2G8 530 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 OR10H4Q8NGA5 316 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 OR6Q1Q8NGQ2 317 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 OR6F1Q8NGZ6 308 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 SPRYD4Q8WW59 207 aaPredicted RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 RELTQ969Z4 430 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 NXPE2Q96DL1 559 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 FER1L6-AS2Q96M78 137 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 CNN2Q99439 309 aaKnown RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 NARFLQ9H6Q4 476 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 DDX28Q9NUL7 540 aaKnown RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 NPIPB13A6NJU9 1138 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 NPIPB4C9JG80 1138 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 SHOXO15266 292 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 ZIC3O60481 467 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 LALBAP00709 142 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 RENP00797 406 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 TFP02787 698 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 GTF2E2P29084 291 aaKnown RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 DNASE1L1P49184 302 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 B2MP61769 119 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 ZNF85Q03923 595 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 GLYR1Q49A26 553 aaPredicted RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 TMPRSS11AQ6ZMR5 421 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 ADPRHL1Q8NDY3 354 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 DYNC2LI1Q8TCX1 351 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 CITED4Q96RK1 184 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 UBL7Q96S82 380 aaPredicted RBP13.97□□□□□ -0.17
LSM6-201ENST00000296581 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 B3GALT5Q9Y2C3 310 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 BOLA1Q9Y3E2 137 aa13.97□□□□□ -0.17
LSM6-201ENST00000296581 A0A0G2JMM0 328 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 A0A1W2PPB8 328 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 A0A1W2PRS3 328 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 KIR3DP1A8MWS1 328 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 TRIM77I1YAP6 450 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 GPX5O75715 221 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 UPK1BO75841 260 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 PLGP00747 810 aaPredicted RBP13.96□□□□□ -0.17
LSM6-201ENST00000296581 LIPCP11150 499 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 TGFBR1P36897 503 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 BDH1Q02338 343 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 ABHD17BQ5VST6 288 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 LIPKQ5VXJ0 399 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 GDPGP1Q6ZNW5 385 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 OR5H6Q8NGV6 325 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 TBX5Q99593 518 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 ALG12Q9BV10 488 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 HDGFL3Q9Y3E1 203 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 PCDHGB7Q9Y5F8 929 aa13.96□□□□□ -0.17
LSM6-201ENST00000296581 RIF1Q5UIP0 2472 aaKnown RBP13.96□□□□□ -0.17
LSM6-201ENST00000296581 AKAP8O43823 692 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 OR2T7P0C7T2 308 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ZNF17P17021 662 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 ITGA3P26006 1051 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ACVR1BP36896 505 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 PPP5CP53041 499 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 STK11Q15831 433 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 FAM122CQ6P4D5 195 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 POC5Q8NA72 575 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 OR2T4Q8NH00 348 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 OR2T27Q8NH04 317 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 UFD1Q92890 307 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 JSRP1Q96MG2 331 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 TSSK2Q96PF2 358 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ISG20L2Q9H9L3 353 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 ABCB10Q9NRK6 738 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ABI3Q9P2A4 366 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 DKKL1Q9UK85 242 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 STUB1Q9UNE7 303 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 CNOT1A5YKK6 2376 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 A0A0G2JMP0 313 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 A0A1W2PNV4 684 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 A0A1W2PQL4 384 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 A0A1W2PRG6 482 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 H7C1C5 153 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 XKRYO14609 159 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ARHGEF9O43307 516 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 SHC1P29353 583 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 SRD5A2P31213 254 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms