RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
VPS28-201ENST00000292510 IL20RAQ9UHF4 553 aa11.7□□□□□ -0.54
VPS28-201ENST00000292510 LYVE1Q9Y5Y7 322 aa11.7□□□□□ -0.54
VPS28-201ENST00000292510 DHRS12A0PJE2 317 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ZNF99A8MXY4 864 aaPredicted RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 M0R1B8 84 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 TNFRSF11BO00300 401 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 PTP4A3O75365 173 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 TRMUO75648 421 aaKnown RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 IGHG1P01857 330 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 RAP2AP10114 183 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 RPL4P36578 427 aaKnown RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 RASSF2P50749 326 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 NR1H2P55055 460 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 CLRN1P58418 232 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ERVK-25P63136 954 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 SPOCK1Q08629 439 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ARMC4Q5T2S8 1044 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ANKRD16Q6P6B7 361 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 LRFN4Q6PJG9 635 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 KLHL24Q6TFL4 600 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ZNF704Q6ZNC4 412 aaPredicted RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 HTRA1Q92743 480 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 HDAC2Q92769 488 aaKnown RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 CHID1Q9BWS9 393 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 LRMDAQ9H2I8 198 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 KRCC1Q9NPI7 259 aaPredicted RBP11.69□□□□□ -0.54
VPS28-201ENST00000292510 TMCC3Q9ULS5 477 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 SIGLEC7Q9Y286 467 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 PLEKHA6Q9Y2H5 1048 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 ADAM18Q9Y3Q7 739 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 U3KQV3 271 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 CADP27708 2225 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 OTOGQ6ZRI0 2925 aa11.69□□□□□ -0.54
VPS28-201ENST00000292510 TCRBV3S1A0A5B6 114 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 IGHMP01871 453 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 CD3EP07766 207 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 QDPRP09417 244 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 ACADSP16219 412 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 ACVR1BP36896 505 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 HMGA2P52926 109 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 SH3BGRP55822 239 aaPredicted RBP11.68□□□□□ -0.54
VPS28-201ENST00000292510 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 PRPS1P60891 318 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
VPS28-201ENST00000292510 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
VPS28-201ENST00000292510 ANKDD1AQ495B1 522 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 OR2T5Q6IEZ7 315 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 ADAM5Q6NVV9 412 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 CLDN22Q8N7P3 220 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 KBTBD8Q8NFY9 601 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 OR9Q2Q8NGE9 314 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 OR2T29Q8NH02 315 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 BOD1Q96IK1 185 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 FOXB1Q99853 325 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 TMEM204Q9BSN7 226 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 MRPL13Q9BYD1 178 aaKnown RBP11.68□□□□□ -0.54
VPS28-201ENST00000292510 POFUT2Q9Y2G5 429 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
VPS28-201ENST00000292510 ARPC4-TTLL3A0A0A6YYG9 625 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 IGKV1D-43A0A0B4J1Z2 117 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 NPIPB13A6NJU9 1138 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 NPIPB4C9JG80 1138 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 H7C1C5 153 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 ABCD4O14678 606 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 DHHO43323 396 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 KRT36O76013 467 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 NDUFB2O95178 105 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 SLC2A10O95528 541 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 WNT11O96014 354 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 CST1P01037 141 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 CD14P08571 375 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 B4GALT1P15291 398 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 CAPZA2P47755 286 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 LCN6P62502 163 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 FMODQ06828 376 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 CD47Q08722 323 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 PGBD2Q6P3X8 592 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 PAMR1Q6UXH9 720 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 ZNF813Q6ZN06 617 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 CCDC121Q6ZUS5 278 aa11.67□□□□□ -0.54
VPS28-201ENST00000292510 PIAS4Q8N2W9 510 aaPredicted RBP11.67□□□□□ -0.54
VPS28-201ENST00000292510 LILRB1Q8NHL6 650 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms