RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 OR5L1Q8NGL2 311 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 OR2T27Q8NH04 317 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 TMEM174Q8WUU8 243 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 SFT2D1Q8WV19 159 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 ALG12Q9BV10 488 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 SUCNR1Q9BXA5 334 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 HRASLSQ9HDD0 168 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 STARD5Q9NSY2 213 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 KPTNQ9Y664 436 aa9.95□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF593O00488 134 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 TRAF3IP2O43734 574 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 HPNP05981 417 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 THBS1P07996 1170 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 TMEM11P17152 192 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SPI1P17947 270 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CR2P20023 1033 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 HIST1H1TP22492 207 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 GABRA2P47869 451 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 LTB4RQ15722 352 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 OR5M10Q6IEU7 315 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SHISA6Q6ZSJ9 500 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 C1orf87Q8N0U7 546 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 RNF175Q8N4F7 328 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 KCNRGQ8N5I3 272 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PGAP3Q96FM1 320 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 UBL7Q96S82 380 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CPPED1Q9BRF8 314 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 NUDT22Q9BRQ3 303 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ATP1B1P05026 303 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 TPOP07202 933 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 HBQ1P09105 142 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 NAGAP17050 411 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CCR9P51686 369 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 RAB11AP62491 216 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 IKZF1Q13422 519 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SLC36A2Q495M3 483 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CD276Q5ZPR3 534 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 TMUB2Q71RG4 321 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SYT9Q86SS6 491 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MDGA1Q8NFP4 955 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 UBXN10Q96LJ8 280 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 C20orf85Q9H1P6 137 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZMAT3Q9HA38 289 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PLSCR3Q9NRY6 295 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 OR52A1Q9UKL2 312 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 TRAPPC4Q9Y296 219 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MRPS28Q9Y2Q9 187 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ATAD5Q96QE3 1844 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 A0A1B0GTW7 788 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CBY3A6NI87 242 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 H7C1C5 153 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PHF1O43189 567 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PMS2P2O95744 297 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CPN1P15169 458 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ENPP1P22413 925 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 EPHA4P54764 986 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PCBD1P61457 104 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 LCN6P62502 163 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 RAB35Q15286 201 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 RTP2Q5QGT7 225 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MRPL2Q5T653 305 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MRPL10Q7Z7H8 261 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 RBMXL3Q8N7X1 1067 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SUMF1Q8NBK3 374 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF680Q8NEM1 530 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 OR5M8Q8NGP6 311 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 FYTTD1Q96QD9 318 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MAP3K3Q99759 626 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 NKX3-1Q99801 234 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF251Q9BRH9 671 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PARP12Q9H0J9 701 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 UBQLN4Q9NRR5 601 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CBLCQ9ULV8 474 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 PTGESO14684 152 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 CSF2RAP15509 400 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 FCER1GP30273 86 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 MZT1Q08AG7 82 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF239Q16600 458 aaKnown RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 HIST2H3AQ71DI3 136 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 OR6S1Q8NH40 331 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 HRASLS5Q96KN8 279 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF583Q96ND8 569 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 FAM173AQ9BQD7 235 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 FAM234AQ9H0X4 552 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 SLCO5A1Q9H2Y9 848 aa9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF629Q9UEG4 869 aaPredicted RBP9.94□□□□□ -0.82
PKNOX1-201ENST00000291547 J3QR89 54 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TRA2BP62995 288 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RAB30Q15771 203 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 KCTD11Q693B1 232 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 IL34Q6ZMJ4 242 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CDH26Q8IXH8 852 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 GCNT2Q8N0V5 402 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 GPR78Q96P69 363 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CCNL2Q96S94 520 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms