RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MAN2C1Q9NTJ4 1040 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 ZC3H12DA2A288 527 aaKnown RBP12.54□□□□□ -0.4
NPC1-201ENST00000269228 A6NHS1 94 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 SPINT1O43278 529 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 ACTL6BO94805 426 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 DNASE1P24855 282 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 CD40LGP29965 261 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 EIF4EBP2Q13542 120 aaPredicted RBP12.54□□□□□ -0.4
NPC1-201ENST00000269228 ZMYND11Q15326 602 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 SLC35D3Q5M8T2 416 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 RAB12Q6IQ22 244 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 VN1R4Q7Z5H5 301 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 ABHD4Q8TB40 342 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 SPACA9Q96E40 222 aaPredicted RBP12.54□□□□□ -0.4
NPC1-201ENST00000269228 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 NOX4Q9NPH5 578 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 ZDBF2Q9HCK1 2354 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 NUP214P35658 2090 aaPredicted RBP12.54□□□□□ -0.4
NPC1-201ENST00000269228 DVL2O14641 736 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 HRO43593 1189 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 TFAP2AP05549 437 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 CD34P28906 385 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 SHC1P29353 583 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 SYT14P1Q58G82 188 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 OR14A2Q96R54 314 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 NUP50Q9UKX7 468 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
NPC1-201ENST00000269228 TDRD15B5MCY1 1934 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SLC2A10O95528 541 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 ATP1B1P05026 303 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 HIST1H1CP16403 213 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 BDKRB2P30411 391 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SNRPGP62308 76 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 IL10RAQ13651 578 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 IHHQ14623 411 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SLCO4A1Q96BD0 722 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 EMC7Q9NPA0 242 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 ZNF346Q9UL40 294 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 SCG5P05408 212 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 CSF1P09603 554 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SNRPBP14678 240 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 ALKBH1Q13686 389 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 SLC16A9Q7RTY1 509 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 TXNDC15Q96J42 360 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 C1QTNF6Q9BXI9 259 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 P4HTMQ9NXG6 502 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SEC14L2O76054 403 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 QDPRP09417 244 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 PRKACBP22694 351 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 TTC9Q92623 222 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 SMCO3A2RU48 225 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 TNFSF8P32971 234 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 EXOSC6Q5RKV6 272 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 ASCC1Q8N9N2 400 aaKnown RBP12.53□□□□□ -0.4
NPC1-201ENST00000269228 OR4D9Q8NGE8 314 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 MED29Q9NX70 200 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
NPC1-201ENST00000269228 F5H0A9 414 aaPredicted RBP12.52□□□□□ -0.4
NPC1-201ENST00000269228 M0R233 179 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 CBX7O95931 251 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 S100A6P06703 90 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 EDN3P14138 238 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 CLDN15P56746 228 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 TEKQ02763 1124 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 KIRREL2Q6UWL6 708 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 BRIX1Q8TDN6 353 aaKnown RBP12.52□□□□□ -0.4
NPC1-201ENST00000269228 WDR34Q96EX3 536 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 TRIB1Q96RU8 372 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 COQ3Q9NZJ6 369 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 SPTA1P02549 2419 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.4
NPC1-201ENST00000269228 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
NPC1-201ENST00000269228 DNAJB6O75190 326 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 TP53P04637 393 aaPredicted RBP12.52□□□□□ -0.41
NPC1-201ENST00000269228 PXKQ7Z7A4 578 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 CCDC71LQ8N9Z2 235 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 FGGYQ96C11 551 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 FKRPQ9H9S5 495 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 GALNT9Q9HCQ5 603 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 NRIP3Q9NQ35 241 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 PLA2G3Q9NZ20 509 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 CACNG2Q9Y698 323 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 SGCEO43556 437 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 EML2O95834 649 aa12.52□□□□□ -0.41
NPC1-201ENST00000269228 BPNT1O95861 308 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms