RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 CLRN3Q8NCR9 226 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 ELP5Q8TE02 316 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC6A18Q96N87 628 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 COPS7AQ9UBW8 275 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 ICKQ9UPZ9 632 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 RP1P56715 2156 aa10.59□□□□□ -0.71
CLSTN3-201ENST00000266546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 BLACEA4D250 179 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 PRSS44E7EML9 344 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 H2BFMP0C1H6 154 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 RNH1P13489 461 aaKnown RBP10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 MAKP20794 623 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 SDHBP21912 280 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 H3F3CQ6NXT2 135 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 ZNF529Q6P280 563 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 TMEFF1Q8IYR6 380 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 OR7G2Q8NG99 324 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC2A12Q8TD20 617 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 GCDHQ92947 438 aaPredicted RBP10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 DVL3Q92997 716 aaPredicted RBP10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 ABHD1Q96SE0 405 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 C12orf57Q99622 126 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 MICU1Q9BPX6 476 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 DUSP23Q9BVJ7 150 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 CMC2Q9NRP2 79 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 RBM7Q9Y580 266 aaKnown RBP10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 ETV7Q9Y603 341 aa10.58□□□□□ -0.71
CLSTN3-201ENST00000266546 YKT6O15498 198 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 LDB3O75112 727 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 CXCL3P19876 107 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 AMY2BP19961 511 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 RAG2P55895 527 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 Q6ZS52 159 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 ABI3BPQ7Z7G0 1075 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 OR51D1Q8NGF3 324 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 PTCHD1Q96NR3 888 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 NMNAT3Q96T66 252 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 H0Y8X5 98 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 EPXP11678 715 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 VAMP2P63027 116 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 GPR18Q14330 331 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 GRM7Q14831 915 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF440Q8IYI8 595 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 SIRT6Q8N6T7 355 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 PFN4Q8NHR9 129 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 MMABQ96EY8 250 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 BMFQ96LC9 184 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 REV1Q9UBZ9 1251 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 CHD5Q8TDI0 1954 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 SNRPGP15A8MWD9 76 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 MAGEB4O15481 346 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 SCGNO76038 276 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 PMS2P2O95744 297 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 PLGP00747 810 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 CHAF1BQ13112 559 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 EXOSC7Q15024 291 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 GSG1Q2KHT4 349 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 VASNQ6EMK4 673 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 ANKRD53Q8N9V6 530 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 OR2A1Q8NGT9 310 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 INTS14Q96SY0 518 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 TRAF4Q9BUZ4 470 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 ALG12Q9BV10 488 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 OR8D2Q9GZM6 311 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 TAS2R5Q9NYW4 299 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 KLK11Q9UBX7 282 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 KCNIP3Q9Y2W7 256 aa10.58□□□□□ -0.72
CLSTN3-201ENST00000266546 ANKRD36A6QL64 1941 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 FCMRO60667 390 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CAMLGP49069 296 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CBFBQ13951 182 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 YOD1Q5VVQ6 348 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC48A1Q6P1K1 146 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC25A32Q9H2D1 315 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PRTFDC1Q9NRG1 225 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PRODH2Q9UF12 536 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CCDC88CQ9P219 2028 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 A0A0B4J2A0 478 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 A0A1B0GV50 99 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CDK2P24941 298 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 C21orf58P58505 322 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 TAS2R20P59543 309 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 BAMBIQ13145 260 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 RNF141Q8WVD5 230 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 C10orf90Q96M02 699 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 DERL3Q96Q80 235 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CDC6Q99741 560 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 URM1Q9BTM9 101 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PBDC1Q9BVG4 233 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms