RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OR10H4Q8NGA5 316 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 OR52N1Q8NH53 320 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 OR2V1Q8NHB1 315 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 C12orf43Q96C57 262 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 TSPAN10Q9H1Z9 355 aaPredicted RBP20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC6A15Q9H2J7 730 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 ACKR4Q9NPB9 350 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 KLHL13Q9P2N7 655 aa20.45■□□□□ 0.86
SMARCB1-201ENST00000263121 ZFHX4Q86UP3 3567 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 KIAA1549Q9HCM3 1950 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 TRAV17A0A0B4J275 112 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 FAM171A2A8MVW0 826 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 VAMP5O95183 116 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 HSMCR30P0CW71 290 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 CD36P16671 472 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 CD97P48960 835 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 LHX2P50458 406 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 BIDP55957 195 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 POU4F3Q15319 338 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 LYPD4Q6UWN0 246 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 TRILQ7L0X0 811 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 KLHL36Q8N4N3 616 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 RAB2BQ8WUD1 216 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 ZHX1-C8orf76Q96EF9 292 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 UCN2Q96RP3 112 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 TIMP4Q99727 224 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 B9D1Q9UPM9 204 aa20.44■□□□□ 0.86
SMARCB1-201ENST00000263121 IGLV1-36A0A0B4J1U3 117 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 DAPL1A0PJW8 107 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 H3BMQ9 156 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 ACOT7O00154 380 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 AHCYL1O43865 530 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 SELENOFO60613 162 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 SCG5P05408 212 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 ZNF43P17038 809 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 EIF2S3P41091 472 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 NAA10P41227 235 aaPredicted RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 CARD18P57730 90 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 MLLT11Q13015 90 aaPredicted RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 GALEQ14376 348 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 IGFL3Q6UXB1 125 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 P2RY8Q86VZ1 359 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 UBQLNLQ8IYU4 475 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 NMD3Q96D46 503 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 TBX5Q99593 518 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 CAB39Q9Y376 341 aaPredicted RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 PCDHGB7Q9Y5F8 929 aa20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 PCDHGA9Q9Y5G4 932 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-201ENST00000263121 IGHV3-15A0A0B4J1V0 119 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 SMAD9O15198 467 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 GABARAPO95166 117 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 OR2T7P0C7T2 308 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 CTLA4P16410 223 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 RGS6P49758 472 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ZNF85Q03923 595 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC10A1Q14973 349 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 RNFT1Q5M7Z0 435 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC35F2Q8IXU6 374 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ZNF511Q8NB15 262 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 OR2T27Q8NH04 317 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 OR10D3Q8NH80 312 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 SMAP2Q8WU79 429 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ARHGAP9Q9BRR9 750 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 EMC6Q9BV81 110 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ALG8Q9BVK2 526 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 MRPL13Q9BYD1 178 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ZDHHC11Q9H8X9 412 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 MARCH7Q9H992 704 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ISYNA1Q9NPH2 558 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC16A7O60669 478 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 NOL3O60936 208 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 CLDN18P56856 261 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 TSTQ16762 297 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 C19orf48Q6RUI8 117 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 ZNF322Q6U7Q0 402 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 HDDC2Q7Z4H3 204 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 TIGD4Q8IY51 512 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 OR6X1Q8NH79 312 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 GATAD2BQ8WXI9 593 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 TM9SF4Q92544 642 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 BCL7BQ9BQE9 202 aa20.42■□□□□ 0.86
SMARCB1-201ENST00000263121 A0A1W2PQL4 384 aaPredicted RBP20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 TRIM64BA6NI03 449 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 CXCL13O43927 109 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 ZNF708P17019 499 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 ENPP1P22413 925 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 CRABP1P29762 137 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC17A1Q14916 467 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 SSX1Q16384 188 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 CTF1Q16619 201 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC16A9Q7RTY1 509 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 SYT14Q8NB59 555 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 RERGLQ9H628 205 aa20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 CCDC86Q9H6F5 360 aaKnown RBP20.41■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC35F4A4IF30 521 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 CCRL2O00421 344 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 PGA4P0DJD7 388 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 PGA3P0DJD8 388 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 EIF1AXP47813 144 aaKnown RBP20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 CENPAP49450 140 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms