RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CDKN2AP42771 156 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 PER3P56645 1201 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 ISL1P61371 349 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 SNRPGP62308 76 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 SIRPAP78324 504 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 RUNX1T1Q06455 604 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 OR2A2Q6IF42 318 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 NHLRC1Q6VVB1 395 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 B3GNT6Q6ZMB0 384 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 BCDIN3DQ7Z5W3 292 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 DOLPP1Q86YN1 238 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 GCNT2Q8N0V5 402 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 GALNT11Q8NCW6 608 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 NOXO1Q8NFA2 376 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 OR9Q1Q8NGQ5 310 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 RHOXF1Q8NHV9 184 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 ZNF566Q969W8 418 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 SLC25A44Q96H78 314 aaPredicted RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 GMPPAQ96IJ6 420 aaPredicted RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 LRR1Q96L50 414 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 Q96MT0 163 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 OR2M2Q96R28 347 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 MED20Q9H944 212 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 RPRD1BQ9NQG5 326 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 GLRX2Q9NS18 164 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 ING1Q9UK53 422 aaPredicted RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 ZNF835Q9Y2P0 537 aa13.85□□□□□ -0.19
GYPC-201ENST00000259254 FLNBO75369 2602 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 SETXQ7Z333 2677 aaKnown RBP13.85□□□□□ -0.19
GYPC-201ENST00000259254 DOPEY2Q9Y3R5 2298 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 TRGV8A0A0C4DH27 118 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 PRSS37A4D1T9 235 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 MRPL33O75394 65 aaKnown RBP13.84□□□□□ -0.19
GYPC-201ENST00000259254 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 SELENOPP49908 381 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
GYPC-201ENST00000259254 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
GYPC-201ENST00000259254 CDK5R2Q13319 367 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 KLHL12Q53G59 568 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 ZNF362Q5T0B9 420 aaPredicted RBP13.84□□□□□ -0.19
GYPC-201ENST00000259254 RTL6Q6ICC9 239 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.84□□□□□ -0.19
GYPC-201ENST00000259254 ZNF786Q8N393 782 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 FAM26EQ8N5C1 309 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 CNEP1R1Q8N9A8 125 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 NPEPL1Q8NDH3 523 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 TMEM45BQ96B21 275 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
GYPC-201ENST00000259254 RBP7Q96R05 134 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 ALG12Q9BV10 488 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 SYT4Q9H2B2 425 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 OR51V1Q9H2C8 321 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 BCO1Q9HAY6 547 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 GP6Q9HCN6 339 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 PARPBPQ9NWS1 579 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 TINAGQ9UJW2 476 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 EMC9Q9Y3B6 208 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 FAM215AQ9Y5M1 114 aa13.84□□□□□ -0.19
GYPC-201ENST00000259254 MED12Q93074 2177 aa13.83□□□□□ -0.19
GYPC-201ENST00000259254 SLC22A23A1A5C7 686 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 OR6C68A6NDL8 312 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 MBD3L4A6NDZ8 208 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 MBD3L3A6NE82 208 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 MBD3L5A6NJ08 208 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 SS18L1O75177 396 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 ENTPD6O75354 484 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 KRT33AO76009 404 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 PGA4P0DJD7 388 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 PGA3P0DJD8 388 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 NR2C1P13056 603 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 AGTR1P30556 359 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 FMO3P31513 532 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 UQCRFS1P47985 274 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 CENPAP49450 140 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 NUDT6P53370 316 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 MEDAGQ5VYS4 303 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 DNM1P34Q6PK57 102 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 GID4Q8IVV7 300 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 WDFY1Q8IWB7 410 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 ZNF100Q8IYN0 542 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 RPRMLQ8N4K4 120 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 PROKR2Q8NFJ6 384 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 BBS1Q8NFJ9 593 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 OR2T4Q8NH00 348 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 MBD3L2Q8NHZ7 208 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 APH1BQ8WW43 257 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 APH1AQ96BI3 265 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 ZNF582Q96NG8 517 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 SNX18Q96RF0 628 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 KCNK17Q96T54 332 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 HCAR1Q9BXC0 346 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 C12orf49Q9H741 205 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 SRA1Q9HD15 236 aaKnown RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 UBAP1Q9NZ09 502 aa13.83□□□□□ -0.2
GYPC-201ENST00000259254 VSX1Q9NZR4 365 aaPredicted RBP13.83□□□□□ -0.2
GYPC-201ENST00000259254 OSGIN2Q9Y236 505 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms