RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TUBA4AP68366 448 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 RUNX1T1Q06455 604 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 FHL1Q13642 323 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 DGCR6Q14129 220 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 SEC23BQ15437 767 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ALG10Q5BKT4 473 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 FGD3Q5JSP0 725 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 LCN8Q6JVE9 175 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ANKRD16Q6P6B7 361 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 TMEM108Q6UXF1 575 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 TMPRSS11FQ6ZWK6 438 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 TUBA1AQ71U36 451 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 SSX8Q7RTT4 187 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 OAFQ86UD1 273 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 IGFN1Q86VF2 1251 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ZDHHC21Q8IVQ6 265 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 AKAP1Q92667 903 aaKnown RBP eCLIP7.45□□□□□ -1.22
TMEM258-201ENST00000257262 NEUROG1Q92886 237 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 NINJ1Q92982 152 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF566Q969W8 418 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ASB9Q96DX5 294 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 SLC25A44Q96H78 314 aaPredicted RBP7.45□□□□□ -1.22
TMEM258-201ENST00000257262 FAM46AQ96IP4 442 aaKnown RBP7.45□□□□□ -1.22
TMEM258-201ENST00000257262 DHRS1Q96LJ7 313 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 PIP5K1AQ99755 562 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 BTBD10Q9BSF8 475 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 FUZQ9BT04 418 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ULBP2Q9BZM5 246 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 NELFAQ9H3P2 528 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 MUC13Q9H3R2 512 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 IL1RAPQ9NPH3 570 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 B3GAT2Q9NPZ5 323 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 GLTPQ9NZD2 209 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF346Q9UL40 294 aaKnown RBP7.45□□□□□ -1.22
TMEM258-201ENST00000257262 RNF115Q9Y4L5 304 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ANKHD1Q8IWZ3 2542 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ARPC4-TTLL3A0A0A6YYG9 625 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MCIDASD6RGH6 385 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ACOT8O14734 319 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 TRMUO75648 421 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 QDPRP09417 244 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 PGA4P0DJD7 388 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 PGA3P0DJD8 388 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ACADSP16219 412 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 PTAFRP25105 342 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 CD40P25942 277 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 RRM2P31350 389 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 OMPP47874 163 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 SLC9A3P48764 834 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ART1P52961 327 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 SH3BGRP55822 239 aaPredicted RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 RIPPLY3P57055 190 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 CLRN1P58418 232 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 SMIM11AP58511 58 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 CTXN1P60606 82 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 UBE2NP61088 152 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MYBPC1Q00872 1141 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 SPIBQ01892 262 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 TRAP1Q12931 704 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 BNIP1Q12981 228 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 HIST3H3Q16695 136 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ANKDD1AQ495B1 522 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ZBED5Q49AG3 693 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 DNAL1Q4LDG9 190 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MTX3Q5HYI7 312 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ARMC4Q5T2S8 1044 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 C1QTNF12Q5T7M4 302 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ADAM5Q6NVV9 412 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 PGM2L1Q6PCE3 622 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 KLHL17Q6TDP4 642 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 KLHL24Q6TFL4 600 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 PIWIL3Q7Z3Z3 882 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF611Q8N823 705 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 LRRC75AQ8NAA5 344 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 KBTBD8Q8NFY9 601 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 OR4K5Q8NGD3 323 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 OR13C2Q8NGS9 318 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MAGEE2Q8TD90 523 aaPredicted RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ASB10Q8WXI3 467 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 LRGUKQ96M69 825 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ALPK1Q96QP1 1244 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF347Q96SE7 839 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 FOXB1Q99853 325 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MRPL13Q9BYD1 178 aaKnown RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 TXNIPQ9H3M7 391 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 OBP2BQ9NPH6 170 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 TMEM5Q9Y2B1 443 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 POFUT2Q9Y2G5 429 aa7.44□□□□□ -1.22
TMEM258-201ENST00000257262 MAGED1Q9Y5V3 778 aaPredicted RBP7.44□□□□□ -1.22
TMEM258-201ENST00000257262 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 IGHV1-18A0A0C4DH31 117 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 SH3PXD2BA1X283 911 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 SHISA9B4DS77 424 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 HS3ST1O14792 307 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 GSC2O15499 205 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 DHHO43323 396 aa7.43□□□□□ -1.22
TMEM258-201ENST00000257262 PTP4A3O75365 173 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms