RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GDNFP39905 211 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 Q96M85 177 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 DCBLD2Q96PD2 775 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 USB1Q9BQ65 265 aaKnown RBP17.43■□□□□ 0.38
PTPRE-201ENST00000254667 NDRG4Q9ULP0 352 aaKnown RBP17.43■□□□□ 0.38
PTPRE-201ENST00000254667 A3GALT2U3KPV4 340 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 CEBPZOSA8MTT3 80 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 S100A7P31151 101 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF93P35789 620 aaPredicted RBP17.42■□□□□ 0.38
PTPRE-201ENST00000254667 RPS18P62269 152 aaKnown RBP17.42■□□□□ 0.38
PTPRE-201ENST00000254667 KCNAB1Q14722 419 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 CHST11Q9NPF2 352 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 RAB22AQ9UL26 194 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 TOR1AO14656 332 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 BLVRBP30043 206 aaPredicted RBP17.42■□□□□ 0.38
PTPRE-201ENST00000254667 CAV3P56539 151 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 MFGE8Q08431 387 aaPredicted RBP17.42■□□□□ 0.38
PTPRE-201ENST00000254667 TBC1D28Q2M2D7 210 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 WDR5BQ86VZ2 330 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 NKAIN4Q8IVV8 208 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 OR7G2Q8NG99 324 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 PFN4Q8NHR9 129 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 PATE1Q8WXA2 126 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 OR14A2Q96R54 314 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 ACKR4Q9NPB9 350 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 ANKRD12Q6UB98 2062 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 IGHV3-20A0A0C4DH32 117 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 PRAMEF4O60810 478 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 RRAS2P62070 204 aaPredicted RBP17.42■□□□□ 0.38
PTPRE-201ENST00000254667 Q6ZTK2 550 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 OR5M11Q96RB7 305 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 SELENOIQ9C0D9 397 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 A0A1B0GV50 99 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 F8W036 122 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 SULT1B1O43704 296 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 DCXRQ7Z4W1 244 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 ST8SIA1Q92185 356 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 PKMYT1Q99640 499 aa17.42■□□□□ 0.38
PTPRE-201ENST00000254667 ZMAT1Q5H9K5 638 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 ADGRE4PQ86SQ3 457 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 BEST4Q8NFU0 473 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 FGF14Q92915 247 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 TAAR8Q969N4 342 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 BORCS7Q96B45 105 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 HNRNPFP52597 415 aaKnown RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 LYPD4Q6UWN0 246 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 SMAP2Q8WU79 429 aaPredicted RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 C1orf123Q9NWV4 160 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 KLF13Q9Y2Y9 288 aaPredicted RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 LILRA5A6NI73 299 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 LCMT2O60294 686 aaKnown RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 ACHEP22303 614 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 MAP2K6P52564 334 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 SELENBP1Q13228 472 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 IDO2Q6ZQW0 420 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 OLIG3Q7RTU3 272 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 CPEB2Q7Z5Q1 589 aaKnown RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 DUS3LQ96G46 650 aaKnown RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 SEMA4CQ9C0C4 833 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 LOC100289279A0A1B0GTE1 492 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 C2CD4DB7Z1M9 353 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 E9PI62 339 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 ECI1P42126 302 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF133P52736 654 aaPredicted RBP17.41■□□□□ 0.38
PTPRE-201ENST00000254667 SYT13Q7L8C5 426 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 FAM26EQ8N5C1 309 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 PRR14Q9BWN1 585 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 SLC23A2Q9UGH3 650 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 DOCK2Q92608 1830 aa17.41■□□□□ 0.38
PTPRE-201ENST00000254667 TSPAN11A1L157 253 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 OR2A25A4D2G3 310 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 PIGAP37287 484 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 GPR3P46089 330 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 RBFOX1Q9NWB1 397 aaKnown RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 TAS2R16Q9NYV7 291 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 SHOXO15266 292 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 AKR7A3O95154 331 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 LIPCP11150 499 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 PTBP1P26599 531 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF385BQ569K4 471 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 LAX1Q8IWV1 398 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 TEAD3Q99594 435 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 FOXQ1Q9C009 403 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 METTL12A8MUP2 240 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 DOK2O60496 412 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 HOXB5P09067 269 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 CLDN12P56749 244 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 AADACL4Q5VUY2 407 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 RBM45Q8IUH3 476 aaKnown RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 NANOGP1Q8N7R0 232 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 GIMAP1Q8WWP7 306 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 NMNAT2Q9BZQ4 307 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 OR6C65A6NJZ3 312 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 M0R082 166 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF254O75437 659 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms