RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 VAMP5O95183 116 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 BLVRAP53004 296 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 CARD18P57730 90 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF239Q16600 458 aaKnown RBP16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 HBMQ6B0K9 141 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF322Q6U7Q0 402 aaPredicted RBP16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 SLC16A12Q6ZSM3 486 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 SNIP1Q8TAD8 396 aaKnown RBP16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 SPRYD4Q8WW59 207 aaPredicted RBP16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNRF4Q8WWF5 429 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 ARHGAP9Q9BRR9 750 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 TIGARQ9NQ88 270 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 MED29Q9NX70 200 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 KCNMB2Q9Y691 235 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 ACACAQ13085 2346 aa16.76■□□□□ 0.27
TNFSF9-201ENST00000245817 LOC102725191A0A1B0GVB3 256 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 A0A1W2PQL4 384 aaPredicted RBP16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SLC22A23A1A5C7 686 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SLC22A1O15245 554 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 AHCYL1O43865 530 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 ATE1O95260 518 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 HLA-DQA2P01906 255 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 CAPZA2P47755 286 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 P2RY4P51582 365 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 BIDP55957 195 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 RAC3P60763 192 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 LSM3P62310 102 aaKnown RBP16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 PPIAP62937 165 aaKnown RBP16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 LINC01590Q5TEZ4 76 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 UBQLNLQ8IYU4 475 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 UFD1Q92890 307 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SCMH1Q96GD3 660 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 B3GAT1Q9P2W7 334 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 B9D1Q9UPM9 204 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 EFSO43281 561 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SELENOFO60613 162 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 MT-ND5P03915 603 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 GADD45AP24522 165 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 PSMA1P25786 263 aaKnown RBP16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 MAGEA5P43359 124 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 TNFSF10P50591 281 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 CTF1Q16619 201 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SLC16A9Q7RTY1 509 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 TMEM251Q8N6I4 163 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF511Q8NB15 262 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 SYT14Q8NB59 555 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 TXNDC15Q96J42 360 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 RBP7Q96R05 134 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF649Q9BS31 505 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 DCUN1D5Q9BTE7 237 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 QPCTLQ9NXS2 382 aa16.75■□□□□ 0.27
TNFSF9-201ENST00000245817 NPIPA2E9PIF3 369 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF670-ZNF695F2Z2N8 137 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 NPIPA3F8WFD2 350 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 DCTN6O00399 190 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 TLX3O43711 291 aaPredicted RBP16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 CPEP16870 476 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ENPP1P22413 925 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 STARP49675 285 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 GFRA1P56159 465 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 CLDN20P56880 219 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 CLRN1P58418 232 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ACTA2P62736 377 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ACTG2P63267 376 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 H3F3AP84243 136 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 HSF2Q03933 536 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 HYAL4Q2M3T9 481 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 LIPKQ5VXJ0 399 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 IGFL2Q6UWQ7 119 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ZBTB46Q86UZ6 589 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 ZFP62Q8NB50 900 aaPredicted RBP16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 OR2V1Q8NHB1 315 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 SNX33Q8WV41 574 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 BABAM2Q9NXR7 383 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 MED13Q9UHV7 2174 aa16.74■□□□□ 0.27
TNFSF9-201ENST00000245817 URB1O60287 2271 aaKnown RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 LOC100506127A0A0U1RQW1 187 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 CENPBD1B2RD01 187 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 J3QLW9 94 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 GLSO94925 669 aaPredicted RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 IGHG1P01857 330 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF19P17023 458 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 EIF1AXP47813 144 aaKnown RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 CD97P48960 835 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 AGFG1P52594 562 aaKnown RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 HCCSP53701 268 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 VBP1P61758 197 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 ZNF85Q03923 595 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 GLO1Q04760 184 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 RUNX1T1Q06455 604 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 ACSM1Q08AH1 577 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 SLC10A1Q14973 349 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 KLBQ86Z14 1044 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 SMAP2Q8WU79 429 aaPredicted RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 TM9SF4Q92544 642 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 ADAD1Q96M93 576 aaKnown RBP16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 INTS14Q96SY0 518 aa16.73■□□□□ 0.27
TNFSF9-201ENST00000245817 KCNK17Q96T54 332 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms