RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
SPCS1-201ENST00000233025 MEAF6Q9HAF1 191 aa13.89□□□□□ -0.19
SPCS1-201ENST00000233025 EXOSC3Q9NQT5 275 aaKnown RBP13.89□□□□□ -0.19
SPCS1-201ENST00000233025 B3GNT2Q9NY97 397 aa13.89□□□□□ -0.19
SPCS1-201ENST00000233025 RNF114Q9Y508 228 aa13.89□□□□□ -0.19
SPCS1-201ENST00000233025 TMED7-TICAM2A0A0A6YYA0 188 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 C5orf63A6NC05 138 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 SRRM5B3KS81 715 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 HMGN4O00479 90 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 AP3D1O14617 1153 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 IGHMP01871 453 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 ZNF14P17017 642 aaPredicted RBP13.88□□□□□ -0.19
SPCS1-201ENST00000233025 BGNP21810 368 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 RYKP34925 604 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 SLC1A6P48664 564 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 RPL14P50914 215 aaKnown RBP13.88□□□□□ -0.19
SPCS1-201ENST00000233025 PROK1P58294 105 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 TEKQ02763 1124 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 PCGF3Q3KNV8 242 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 USP51Q70EK9 711 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 PIGWQ7Z7B1 504 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 BHLHE22Q8NFJ8 381 aaPredicted RBP13.88□□□□□ -0.19
SPCS1-201ENST00000233025 CNOT9Q92600 299 aaKnown RBP13.88□□□□□ -0.19
SPCS1-201ENST00000233025 RAB1CQ92928 201 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 CCDC115Q96NT0 180 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 SLC35A5Q9BS91 424 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 NKIRAS2Q9NYR9 191 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 SEC14L4Q9UDX3 406 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 MARCOQ9UEW3 520 aaPredicted RBP13.88□□□□□ -0.19
SPCS1-201ENST00000233025 DUSP13Q9UII6 198 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 OSGIN1Q9UJX0 560 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 TMED7Q9Y3B3 224 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 NOX1Q9Y5S8 564 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 INSIG2Q9Y5U4 225 aa13.88□□□□□ -0.19
SPCS1-201ENST00000233025 SACSQ9NZJ4 4579 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 LIPT2A6NK58 231 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 SDHDO14521 159 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 SNX3O60493 162 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 EDF1O60869 148 aaKnown RBP13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ZNF432O94892 652 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 PLATP00750 562 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 CRYBA1P05813 215 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 CHRM4P08173 479 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 LBPP18428 481 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
SPCS1-201ENST00000233025 IL12AP29459 219 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 CDKN2CP42773 168 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
SPCS1-201ENST00000233025 KCNJ10P78508 379 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 PDCD1Q15116 288 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 NKPD1Q17RQ9 610 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 RUSC1-AS1Q66K80 236 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 EPHX4Q8IUS5 362 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ANKFN1Q8N957 763 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ST7LQ8TDW4 575 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 PMM1Q92871 262 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
SPCS1-201ENST00000233025 HINT3Q9NQE9 182 aaKnown RBP13.87□□□□□ -0.19
SPCS1-201ENST00000233025 AIG1Q9NVV5 245 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ASH2LQ9UBL3 628 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 ARL2BPQ9Y2Y0 163 aa13.87□□□□□ -0.19
SPCS1-201ENST00000233025 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 AGAP5A6NIR3 686 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CHI3L1P36222 383 aaPredicted RBP13.86□□□□□ -0.19
SPCS1-201ENST00000233025 HTR3AP46098 478 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CAPZA2P47755 286 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 UFM1P61960 85 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 SYPL1Q16563 259 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 TRMT5Q32P41 509 aaKnown RBP13.86□□□□□ -0.19
SPCS1-201ENST00000233025 GPAT3Q53EU6 434 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 BLOC1S3Q6QNY0 202 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CCDC121Q6ZUS5 278 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 RNF130Q86XS8 419 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CCDC36Q8IYA8 594 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 VPS37AQ8NEZ2 397 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 GTF3AQ92664 365 aaKnown RBP13.86□□□□□ -0.19
SPCS1-201ENST00000233025 TSPAN32Q96QS1 320 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 MRI1Q9BV20 369 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 CHIAQ9BZP6 476 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.86□□□□□ -0.19
SPCS1-201ENST00000233025 PNPOQ9NVS9 261 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 UBAP1Q9NZ09 502 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 TAAR3PQ9P1P4 343 aa13.86□□□□□ -0.19
SPCS1-201ENST00000233025 IGLV3-9A0A075B6K5 115 aa13.85□□□□□ -0.19
SPCS1-201ENST00000233025 CLPTM1O96005 669 aa13.85□□□□□ -0.19
SPCS1-201ENST00000233025 HLA-HP01893 362 aa13.85□□□□□ -0.19
SPCS1-201ENST00000233025 GPIP06744 558 aa13.85□□□□□ -0.19
SPCS1-201ENST00000233025 S100A3P33764 101 aa13.85□□□□□ -0.19
SPCS1-201ENST00000233025 IDH2P48735 452 aaKnown RBP13.85□□□□□ -0.19
SPCS1-201ENST00000233025 POLR2HP52434 150 aaKnown RBP13.85□□□□□ -0.19
SPCS1-201ENST00000233025 NME5P56597 212 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms