RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 OR5L2Q8NGL0 311 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NUBPLQ8TB37 319 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 BRIX1Q8TDN6 353 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 DUSP19Q8WTR2 217 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 FAM122AQ96E09 287 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 OR5M11Q96RB7 305 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NEU1Q99519 415 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SEMA4CQ9C0C4 833 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NANSQ9NR45 359 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 GFOD1Q9NXC2 390 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CLEC2DQ9UHP7 191 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ENPP5Q9UJA9 477 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LOXL2Q9Y4K0 774 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 U3KQE9 123 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PRRC2CQ9Y520 2896 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 EML6Q6ZMW3 1958 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MUC6Q6W4X9 2439 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 COL5A1P20908 1838 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF354AO60765 605 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC25A12O75746 678 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SERPINI2O75830 405 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZFAND5O76080 213 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 STK17BO94768 372 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TK1P04183 234 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ITGA5P08648 1049 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ADRA2AP08913 450 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CLEC2LP0C7M8 214 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PNMTP11086 282 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PIPP12273 146 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ACVR2AP27037 513 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TACR3P29371 465 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LCN1P31025 176 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CCKBRP32239 447 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC1A3P43003 542 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMED10P49755 219 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 FBXW4P57775 412 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RAB14P61106 215 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RPS7P62081 194 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 DBPQ10586 325 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 C1DQ13901 141 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SPCS2Q15005 226 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TOMM34Q15785 309 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 C3orf36Q3SXR2 165 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 GXYLT1Q4G148 440 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF468Q5VIY5 522 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NXNL2Q5VZ03 156 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LINC00114Q6XXX2 140 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 B3GLCTQ6Y288 498 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MRGPREQ86SM8 312 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 IGFN1Q86VF2 1251 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NAXDQ8IW45 347 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LNX2Q8N448 690 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF441Q8N8Z8 693 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 POMGNT2Q8NAT1 580 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF248Q8NDW4 579 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NFAM1Q8NET5 270 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 OIT3Q8WWZ8 545 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RPL3LQ92901 407 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TP53INP1Q96A56 240 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SGTBQ96EQ0 304 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RNFT2Q96EX2 444 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MGLLQ99685 303 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 KLHDC3Q9BQ90 382 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 WDR77Q9BQA1 342 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CDCA4Q9BXL8 241 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 DEFB126Q9BYW3 111 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 STRADBQ9C0K7 418 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 OR51V1Q9H2C8 321 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 GPN2Q9H9Y4 310 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMEM9BQ9NQ34 198 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 HINT3Q9NQE9 182 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 EXOSC3Q9NQT5 275 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MED17Q9NVC6 651 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MYOTQ9UBF9 498 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LPAR3Q9UBY5 353 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PISDQ9UG56 409 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 FAM186AA6NE01 2351 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 A0A0U1RQV5 110 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PNMA8CA0A1B0GUJ8 204 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 A0A1W2PQD3 144 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PRR23D1E9PI22 279 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 E9PI62 339 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 M0R082 166 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 M0R3G1 203 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 BHLHE40O14503 412 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 AIREO43918 545 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NDUFS6O75380 124 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NDUFB2O95178 105 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PPP1R3DO95685 299 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RAB36O95755 333 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF806P0C7X5 589 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PRR23D2P0DMB1 279 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CD59P13987 128 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 TCN2P20062 427 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PGCP20142 388 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms