RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 GMEB1Q9Y692 573 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 B8ZZF3 427 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 ARPC5O15511 151 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 MT-ATP6P00846 226 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 NID1P14543 1247 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 MMP11P24347 488 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 HTR2CP28335 458 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 ERP29P30040 261 aaKnown RBP16.92■□□□□ 0.3
CLIP2-201ENST00000223398 CLDN6P56747 220 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 RPL27P61353 136 aaKnown RBP16.92■□□□□ 0.3
CLIP2-201ENST00000223398 XKR7Q5GH72 579 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 SLC16A9Q7RTY1 509 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR4N2Q8NGD1 307 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 ISL2Q96A47 359 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 ANKRD19PQ9H560 264 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 NKX6-3A6NJ46 265 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 CLDN24A6NM45 220 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 SLC9A3R2Q15599 337 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 C9orf152Q5JTZ5 239 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-201ENST00000223398 LRRC30A6NM36 301 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 TOR1AO14656 332 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 TNFSF11O14788 317 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 HRO43593 1189 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 ETHE1O95571 254 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 QDPRP09417 244 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 GPR3P46089 330 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 LRRC56Q8IYG6 542 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-201ENST00000223398 DNAJC22Q8N4W6 341 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 EXD3Q8N9H8 876 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR2T35Q8NGX2 323 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 C11orf40Q8WZ69 217 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR14A2Q96R54 314 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 SULT4A1Q9BR01 284 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
CLIP2-201ENST00000223398 HRASLSQ9HDD0 168 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 CHST11Q9NPF2 352 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR6C76A6NM76 312 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 EMP3P54852 163 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 SLC14A1Q13336 389 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 SECTM1Q8WVN6 248 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 OR52A1Q9UKL2 312 aa16.92■□□□□ 0.3
CLIP2-201ENST00000223398 TFP02787 698 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 GUSBP08236 651 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 NME1P15531 152 aaKnown RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 NDUFB7P17568 137 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TGM4P49221 684 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 BORAQ6PGQ7 559 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 SLC7A13Q8TCU3 470 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 RAB3CQ96E17 227 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 F5H5P2 479 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 GSTP1P09211 210 aaKnown RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 B4GALNT1Q00973 533 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 ILKQ13418 452 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 MEF2DQ14814 521 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM215Q68D42 235 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 KMT5CQ86Y97 462 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 MYOTQ9UBF9 498 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 ZC3H12DA2A288 527 aaKnown RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM221A6NGB7 291 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 M0R296 226 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 SHC1P29353 583 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 BSGP35613 385 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 NKX2-5P52952 324 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 RIPPLY1Q0D2K3 151 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 OCSTAMPQ9BR26 566 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM246Q9BRR3 403 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 GPRIN2O60269 458 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 RPA2P15927 270 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 RPP30P78346 268 aaKnown RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 CORO6Q6QEF8 472 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 GFRALQ6UXV0 394 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 BPIFB2Q8N4F0 458 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 HRASLS5Q96KN8 279 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 FIGNL2A6NMB9 653 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 GIFP27352 417 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 PIGAP37287 484 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 METAP1DQ6UB28 335 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TP53I13Q8NBR0 393 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-201ENST00000223398 OR56B1Q8NGI3 324 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 TBCCD1Q9NVR7 557 aa16.91■□□□□ 0.3
CLIP2-201ENST00000223398 PPM1DO15297 605 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 PTPN6P29350 595 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 TEKQ02763 1124 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 TBCEQ15813 527 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-201ENST00000223398 ANKRD16Q6P6B7 361 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 MVB12AQ96EY5 273 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 TRBV5-4A0A0C4DH59 114 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 RAB4BP61018 213 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 RPL3LQ92901 407 aaKnown RBP16.9■□□□□ 0.3
CLIP2-201ENST00000223398 COLQQ9Y215 455 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-201ENST00000223398 C7orf72A4D263 438 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 MT-CO2P00403 227 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 FZD2Q14332 565 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms