RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF26P17031 533 aaPredicted RBP11.08□□□□□ -0.64
LSM5-201ENST00000223084 CD53P19397 219 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 CD40P25942 277 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 RRM2P31350 389 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 OMPP47874 163 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 SH3BGRP55822 239 aaPredicted RBP11.08□□□□□ -0.64
LSM5-201ENST00000223084 CTXN1P60606 82 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 UBE2NP61088 152 aaKnown RBP11.08□□□□□ -0.64
LSM5-201ENST00000223084 RPS4XP62701 263 aaKnown RBP11.08□□□□□ -0.64
LSM5-201ENST00000223084 MYBPC1Q00872 1141 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 BNIP1Q12981 228 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ALG10Q5BKT4 473 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ARMC4Q5T2S8 1044 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 LRFN4Q6PJG9 635 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 TMPRSS11FQ6ZWK6 438 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 OAFQ86UD1 273 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ASB9Q96DX5 294 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
LSM5-201ENST00000223084 BOD1Q96IK1 185 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 ZNF347Q96SE7 839 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 BTBD10Q9BSF8 475 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 POFUT2Q9Y2G5 429 aa11.08□□□□□ -0.64
LSM5-201ENST00000223084 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ZNF99A8MXY4 864 aaPredicted RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 HS3ST1O14792 307 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 TRMUO75648 421 aaKnown RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 IGHG1P01857 330 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 QDPRP09417 244 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 B4GALT1P15291 398 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ACADSP16219 412 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 PTAFRP25105 342 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 LIMS1P48059 325 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 ART1P52961 327 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 CLRN1P58418 232 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 SMIM11AP58511 58 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ZBED5Q49AG3 693 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 DNAL1Q4LDG9 190 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 KLHL17Q6TDP4 642 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 TMEM108Q6UXF1 575 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ZNF813Q6ZN06 617 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 SSX8Q7RTT4 187 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 SYT14Q8NB59 555 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 MAGEE2Q8TD90 523 aaPredicted RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 HTRA1Q92743 480 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 HDAC2Q92769 488 aaKnown RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 NINJ1Q92982 152 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ALPK1Q96QP1 1244 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 GPA33Q99795 319 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 FOXB1Q99853 325 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 TXNIPQ9H3M7 391 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 ZNF346Q9UL40 294 aaKnown RBP11.07□□□□□ -0.64
LSM5-201ENST00000223084 EDARQ9UNE0 448 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 RTTNQ86VV8 2226 aa11.07□□□□□ -0.64
LSM5-201ENST00000223084 OTOGQ6ZRI0 2925 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 DHHO43323 396 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 PTP4A3O75365 173 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 DNAJC8O75937 253 aaPredicted RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 ACVR1BP36896 505 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 CAPZA2P47755 286 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 SLC9A3P48764 834 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 ERVK-25P63136 954 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 CHRNB3Q05901 458 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 PPP1R8Q12972 351 aaKnown RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 TESK1Q15569 626 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 ZNF672Q499Z4 452 aaPredicted RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 PGM2L1Q6PCE3 622 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 PIWIL3Q7Z3Z3 882 aaKnown RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 CLDN22Q8N7P3 220 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 NOXO1Q8NFA2 376 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 RSRC1Q96IZ7 334 aaKnown RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 TSPAN32Q96QS1 320 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 CCL19Q99731 98 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 IL20RAQ9UHF4 553 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 AURKCQ9UQB9 309 aa11.06□□□□□ -0.64
LSM5-201ENST00000223084 MAGED1Q9Y5V3 778 aaPredicted RBP11.06□□□□□ -0.64
LSM5-201ENST00000223084 SETD2Q9BYW2 2564 aaPredicted RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 UNC119BA6NIH7 251 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 GSC2O15499 205 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 OR10H3O60404 316 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 SLC2A10O95528 541 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 STAMBPO95630 424 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 IGHMP01871 453 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 HLA-HP01893 362 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 CELA3BP08861 270 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 PATE4P0C8F1 98 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms