RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PGA4P0DJD7 388 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 PGA3P0DJD8 388 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 VHLP40337 213 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 OR3A2P47893 321 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 SLX4IPQ5VYV7 408 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 MTFR2Q6P444 385 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 IZUMO2Q6UXV1 221 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 TFAP2EQ6VUC0 442 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 PTCHD4Q6ZW05 846 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 LIX1LQ8IVB5 337 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 SDR9C7Q8NEX9 313 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 NOXO1Q8NFA2 376 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 OR52E2Q8NGJ4 325 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 OR6N1Q8NGY5 312 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 TEX12Q9BXU0 123 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 OPN3Q9H1Y3 402 aaPredicted RBP24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 SLCO5A1Q9H2Y9 848 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 ERRFI1Q9UJM3 462 aaPredicted RBP24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 M0R129 80 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 DVL2O14641 736 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 CSNK1A1P48729 337 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 CD47Q08722 323 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 TSPO2Q5TGU0 170 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 UBE2J2Q8N2K1 259 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 CYGBQ8WWM9 190 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 ALKBH3Q96Q83 286 aaPredicted RBP24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 NMNAT3Q96T66 252 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 FAM118AQ9NWS6 357 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 TVP23BQ9NYZ1 205 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 COQ3Q9NZJ6 369 aa24.1■■□□□ 1.45
CHMP4B-201ENST00000217402 HIVEP3Q5T1R4 2406 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 EEF1E1-BLOC1S5C9J1V9 151 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 M0R3G1 203 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 EEF1E1O43324 174 aaKnown RBP24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 UPK3AO75631 287 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 IL18BPO95998 194 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 CGAP01215 116 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 PLA2G2AP14555 144 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 CDKN2AP42771 156 aaKnown RBP24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 LEG1Q6P5S2 330 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 ADCK1Q86TW2 530 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 KCNK17Q96T54 332 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 MRPL13Q9BYD1 178 aaKnown RBP24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC7A10Q9NS82 523 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 ALPK2Q86TB3 2170 aa24.09■■□□□ 1.45
CHMP4B-201ENST00000217402 INTS1Q8N201 2190 aaKnown RBP24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 RIIAD1A6NNX1 92 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 KRT33AO76009 404 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 PHYHD1Q5SRE7 291 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 LUZP2Q86TE4 346 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 C20orf196Q8IYI0 205 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 CYB561A3Q8NBI2 242 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 RELL2Q8NC24 303 aaPredicted RBP24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 ZNF555Q8NEP9 628 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC38A2Q96QD8 506 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 CMC2Q9NRP2 79 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 PLSCR4Q9NRQ2 329 aa24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 FOXD3Q9UJU5 478 aaPredicted RBP24.08■■□□□ 1.45
CHMP4B-201ENST00000217402 PRSS37A4D1T9 235 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 SURF4O15260 269 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 IFNGP01579 166 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 HMGN1P05114 100 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 CHRNB4P30926 498 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 FMODQ06828 376 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 DBPQ10586 325 aaPredicted RBP24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 SNAPC1Q16533 368 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 C12orf73Q69YU5 71 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 GPR137CQ8N3F9 429 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF610Q8N9Z0 462 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 PLEKHA8Q96JA3 519 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 HRASLS5Q96KN8 279 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 SYT4Q9H2B2 425 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 UPB1Q9UBR1 384 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 KLHL21Q9UJP4 597 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 GPR52Q9Y2T5 361 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 GMPPBQ9Y5P6 360 aa24.07■■□□□ 1.44
CHMP4B-201ENST00000217402 LOC100130705A0A1B0GUX0 176 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 ZG16O60844 167 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 CD8BP10966 210 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 CRMP1Q14194 572 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF362Q5T0B9 420 aaPredicted RBP24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 DHRSXQ8N5I4 330 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 SLC37A3Q8NCC5 494 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 FAM81AQ8TBF8 368 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 TMEM54Q969K7 222 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 ALG12Q9BV10 488 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 ADI1Q9BV57 179 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 PRRG3Q9BZD7 231 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 RASSF4Q9H2L5 321 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 PIGMQ9H3S5 423 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 FN3KQ9H479 309 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 GLTPQ9NZD2 209 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 SLC22A23A1A5C7 686 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF3P17036 446 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 GGT2P36268 569 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 FAPQ12884 760 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 FBXW9Q5XUX1 488 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 POMGNT2Q8NAT1 580 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 NPEPL1Q8NDH3 523 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms