RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 LY6G6FQ5SQ64 297 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 FAM83HQ6ZRV2 1179 aaPredicted RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 CAMKMTQ7Z624 323 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 OR52E2Q8NGJ4 325 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 GRHL3Q8TE85 626 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 GBF1Q92538 1859 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 TRBV23OR9-2A0A075B6M9 112 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 PRAMEF27A3QJZ7 478 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 C9JQL5 133 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 GJB5O95377 273 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 F10P00742 488 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 HMGN2P05204 90 aaKnown RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 HEXAP06865 529 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 CD300LDQ6UXZ3 194 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 LRP11Q86VZ4 500 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 BPIFB2Q8N4F0 458 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 MFSD8Q8NHS3 518 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 MRPL17Q9NRX2 175 aaKnown RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 FBXO7Q9Y3I1 522 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 KCNE3Q9Y6H6 103 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 URB1O60287 2271 aaKnown RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 RAB40ALP0C0E4 278 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 MAOAP21397 527 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
PTPRA-201ENST00000216877 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
PTPRA-201ENST00000216877 CXADRP78310 365 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF85Q03923 595 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 IL10RAQ13651 578 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 MEF2DQ14814 521 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 AGERQ15109 404 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 TEX30Q5JUR7 227 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 TMEM205Q6UW68 189 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF511Q8NB15 262 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 RAB40AQ8WXH6 277 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 MOAP1Q96BY2 351 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PELI1Q96FA3 418 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 MYNNQ9NPC7 610 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 SIRT7Q9NRC8 400 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 IL17BQ9UHF5 180 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 TSPAN6O43657 245 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 NME2P1O60361 137 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 GNRH1P01148 92 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 HCKP08631 526 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PAX6P26367 422 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PKIAP61925 76 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 ARSIQ5FYB1 569 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 DMKNQ6E0U4 476 aaPredicted RBP13.41□□□□□ -0.26
PTPRA-201ENST00000216877 HAVCR1Q96D42 359 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 NEUROD4Q9HD90 331 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 NPIPB9F8W1W9 429 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 B4GALT2O60909 372 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 CYB5AP00167 134 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 GIMD1P0DJR0 217 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PBX2P40425 430 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 GATMP50440 423 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 Q6ZRG5 221 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PXKQ7Z7A4 578 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PFN4Q8NHR9 129 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 PIK3IP1Q96FE7 263 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
PTPRA-201ENST00000216877 TRPM7Q96QT4 1865 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 ELOA3DA6NLF2 546 aaPredicted RBP13.4□□□□□ -0.26
PTPRA-201ENST00000216877 IMPA1P29218 277 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 TSFMP43897 325 aaKnown RBP13.4□□□□□ -0.26
PTPRA-201ENST00000216877 CSNK1EP49674 416 aaKnown RBP13.4□□□□□ -0.26
PTPRA-201ENST00000216877 STARD6P59095 220 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 FOXK2Q01167 660 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 CDK5R1Q15078 307 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 MPPED2Q15777 294 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 ELOA3BQ3SY89 546 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 SLCO4C1Q6ZQN7 724 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
PTPRA-201ENST00000216877 SLC43A2Q8N370 569 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 ELOA3Q8NG57 546 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 OR2L5Q8NG80 312 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 OR5M8Q8NGP6 311 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 OR13C9Q8NGT0 318 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 ZDHHC6Q9H6R6 413 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 A0A087WV48 116 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 UMAD1C9J7I0 102 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 EMC8O43402 210 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 F11P03951 625 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 HIST1H1BP16401 226 aaKnown RBP13.4□□□□□ -0.26
PTPRA-201ENST00000216877 SULT1A1P50225 295 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 CAV2P51636 162 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF813Q6ZN06 617 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 OVCH1Q7RTY7 1134 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 CHST4Q8NCG5 386 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 SMIM19Q96E16 107 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 UCK1Q9HA47 277 aa13.4□□□□□ -0.26
PTPRA-201ENST00000216877 BCO1Q9HAY6 547 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms