RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ABHD16AO95870 558 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 MAOAP21397 527 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ITPKBP27987 946 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 PTGS2P35354 604 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 GPR3P46089 330 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 AP3S2P59780 193 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 OC90Q02509 493 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 HTR4Q13639 388 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ALKBH1Q13686 389 aaKnown RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 C2orf68Q2NKX9 166 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 KIAA1324Q6UXG2 1013 aaKnown RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 SLC22A18ASQ8N1D0 253 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 MEIOBQ8N635 442 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 C10orf53Q8N6V4 93 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 OR13H1Q8NG92 308 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 DNAJA3Q96EY1 480 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ULBP3Q9BZM4 244 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ING1Q9UK53 422 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 NUP50Q9UKX7 468 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 PYCARD-AS1I3L0S3 204 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 SULT1B1O43704 296 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 FCER2P06734 321 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 GUSBP08236 651 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 RAB40ALP0C0E4 278 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 VSIG10L2P0DP72 767 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ADH7P40394 386 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 CTXN1P60606 82 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 PRPS1P60891 318 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 PSMA6P60900 246 aaKnown RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 EGR4Q05215 589 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 IL10RAQ13651 578 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF74Q16587 644 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 SFRP5Q5T4F7 317 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 SLC16A9Q7RTY1 509 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 TMPRSS12Q86WS5 348 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 GLB1L2Q8IW92 636 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 ZSCAN1Q8NBB4 408 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 OR4D10Q8NGI6 311 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 GPX7Q96SL4 187 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-233ENST00000642021 MPDZO75970 2070 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 A0A1B0GTQ1 180 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 OR2M5A3KFT3 312 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CTNSO60931 367 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 NDUFB6O95139 128 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 SIX6O95475 246 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CALCBP10092 127 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CPN1P15169 458 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 MST1P26927 711 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 HAAOP46952 286 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 EPHA4P54764 986 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 NHLRC3Q5JS37 347 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF626Q68DY1 528 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CDH24Q86UP0 819 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 EID2Q8N6I1 236 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-233ENST00000642021 G6PC3Q9BUM1 346 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 OR10A5Q9H207 317 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 WDR76Q9H967 626 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 TRIOO75962 3097 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 ACOT7O00154 380 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CD14P08571 375 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CSRP1P21291 193 aaKnown RBP12.57□□□□□ -0.4
PHGDH-233ENST00000642021 GRK6P43250 576 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 EFNB2P52799 333 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
PHGDH-233ENST00000642021 RAB14P61106 215 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 C1orf61Q13536 156 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 KLHL26Q53HC5 615 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 PXDC1Q5TGL8 231 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 SLC6A19Q695T7 634 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 BIVMQ86UB2 503 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 METTL27Q8N6F8 245 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-233ENST00000642021 CCDC74AQ96AQ1 378 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 MRPL48Q96GC5 212 aaKnown RBP12.57□□□□□ -0.4
PHGDH-233ENST00000642021 RDH8Q9NYR8 311 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 SCML1Q9UN30 329 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 HIF3AQ9Y2N7 669 aa12.57□□□□□ -0.4
PHGDH-233ENST00000642021 TRBV5-5A0A0J9YX44 114 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ELOA3DA6NLF2 546 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 MCRIP1C9JLW8 97 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 GLSO94925 669 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 OR2A4O95047 310 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 AKR7A3O95154 331 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 CBX5P45973 191 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 CCR4P51679 360 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ELOA3BQ3SY89 546 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ALG10Q5BKT4 473 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 YOD1Q5VVQ6 348 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 DPY19L4Q7Z388 723 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ATG4DQ86TL0 474 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ELOA3Q8NG57 546 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms