RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 OR52D1Q9H346 318 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 TIGARQ9NQ88 270 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 IL20RAQ9UHF4 553 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF407Q9C0G0 2248 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 OR14I1A6ND48 311 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 AQP7P3A6NL99 342 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 ZAR1LA6NP61 321 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF814B7Z6K7 855 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 MCIDASD6RGH6 385 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 C11orf98E9PRG8 122 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PLPP3O14495 311 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 BCKDKO14874 412 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 SMAD9O15198 467 aaKnown RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 RNF13O43567 381 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 EIF1BO60739 113 aaKnown RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 RAMP1O60894 148 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 SYNGR4O95473 234 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PPP1R3DO95685 299 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 TSPAN19P0C672 248 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 ADORA3P0DMS8 318 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 EPHA2P29317 976 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 HOXC12P31275 282 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 RPL4P36578 427 aaKnown RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 POLR2IP36954 125 aaKnown RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 CAPGP40121 348 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 HSPA13P48723 471 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 P2RY4P51582 365 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 CRISP1P54107 249 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 CARD18P57730 90 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 FXYD6P3P58550 94 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PRPS1P60891 318 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PUDPQ08623 228 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 NPRL3Q12980 569 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PGGHGQ32M88 737 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 C6orf52Q5T4I8 152 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 ABLIM2Q6H8Q1 611 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PAQR6Q6TCH4 344 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 H1FNTQ75WM6 255 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 CHERPQ8IWX8 916 aaKnown RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PM20D2Q8IYS1 436 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 SLC43A2Q8N370 569 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 OR2T33Q8NG76 320 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 OR5M9Q8NGP3 310 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 OR4Q3Q8NH05 313 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 GPX7Q96SL4 187 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 TUBA1CQ9BQE3 449 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 NAA11Q9BSU3 229 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 IFT27Q9BW83 186 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 TSSK6Q9BXA6 273 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 SLC25A19Q9HC21 320 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 PAQR5Q9NXK6 330 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 TAS2R5Q9NYW4 299 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 IL20Q9NYY1 176 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 KLHL13Q9P2N7 655 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 B3GALT5Q9Y2C3 310 aa8.36□□□□□ -1.07
PHGDH-228ENST00000641847 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-228ENST00000641847 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 GTF3C1Q12789 2109 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 LOC100130705A0A1B0GUX0 176 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 A6NNC1 897 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 CLCA1A8K7I4 914 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 RNF212BA8MTL3 300 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 BHLHE40O14503 412 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 SERPINI2O75830 405 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 PLGP00747 810 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 F13BP05160 661 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 AHCYP23526 432 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 AGFG1P52594 562 aaKnown RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 CTXN1P60606 82 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 NKX6-1P78426 367 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 H3F3AP84243 136 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 POU3F1Q03052 451 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 ZP4Q12836 540 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 TOP3AQ13472 1001 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 GINS1Q14691 196 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 PON3Q15166 354 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 PTGES3Q15185 160 aaKnown RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 SLC25A35Q3KQZ1 300 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 SLX4IPQ5VYV7 408 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 TMEM236Q5W0B7 351 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 SLC27A4Q6P1M0 643 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 DPY19L2P2Q6ZN68 376 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 FCRLAQ7L513 359 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 GPAT4Q86UL3 456 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 KDM8Q8N371 416 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 MARVELD2Q8N4S9 558 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 DHRSXQ8N5I4 330 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 FAM222BQ8WU58 562 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 ROBO4Q8WZ75 1007 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 PITX2Q99697 317 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 INIPQ9NRY2 104 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 PNPLA3Q9NST1 481 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 FAM118AQ9NWS6 357 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms