RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CAPN7Q9Y6W3 813 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 LOC100653049A0A140TA62 436 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 CD5LO43866 347 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 KRT34O76011 436 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 SEC14L2O76054 403 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 OR4A8P0C604 315 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 IFNGR1P15260 489 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 IFNA8P32881 189 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 GZMMP51124 257 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 TAS2R41P59536 307 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 ZP4Q12836 540 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 GSG1Q2KHT4 349 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 SLC35D2Q76EJ3 337 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 NANOGNBQ7Z5D8 188 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 MDP1Q86V88 176 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 CARM1Q86X55 608 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 ZNF837Q96EG3 531 aaPredicted RBP16.47■□□□□ 0.23
CLN6-221ENST00000637494 FOXB1Q99853 325 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
CLN6-221ENST00000637494 POLR2J3Q9H1A7 115 aaKnown RBP16.47■□□□□ 0.23
CLN6-221ENST00000637494 DENND2DQ9H6A0 471 aaPredicted RBP16.47■□□□□ 0.23
CLN6-221ENST00000637494 MYOZ1Q9NP98 299 aaPredicted RBP16.47■□□□□ 0.23
CLN6-221ENST00000637494 YAE1D1Q9NRH1 226 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 FBXL3Q9UKT7 428 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 SPEF1Q9Y4P9 236 aa16.47■□□□□ 0.23
CLN6-221ENST00000637494 SLC22A2O15244 555 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 RAB36O95755 333 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 NPR2P20594 1047 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 CALCRP30988 508 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 PDLIM4P50479 330 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 EFNB3Q15768 340 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 PHYHD1Q5SRE7 291 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 WDR88Q6ZMY6 472 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 DEF8Q6ZN54 512 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 CALHM3Q86XJ0 350 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 OR4D11Q8NGI4 311 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 OR6X1Q8NH79 312 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 C10orf82Q8WW14 230 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 ZNF566Q969W8 418 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 RAB1BQ9H0U4 201 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 ZNF442Q9H7R0 627 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 AP3M1Q9Y2T2 418 aa16.46■□□□□ 0.23
CLN6-221ENST00000637494 IGHV2OR16-5A0A0B4J2B6 119 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 FXYD1O00168 92 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 CRLF1O75462 422 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 UBL3O95164 117 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 CELA3BP08861 270 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 B4GALT1P15291 398 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 LSP1P33241 339 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 RBM34P42696 430 aaKnown RBP16.45■□□□□ 0.22
CLN6-221ENST00000637494 GUCY1A3Q02108 690 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 KRTAP1-1Q07627 177 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 LOXL1Q08397 574 aaPredicted RBP16.45■□□□□ 0.22
CLN6-221ENST00000637494 DAG1Q14118 895 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 ADIPOQQ15848 244 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 MST1LQ2TV78 715 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 LRRC23Q53EV4 343 aaPredicted RBP16.45■□□□□ 0.22
CLN6-221ENST00000637494 HDDC2Q7Z4H3 204 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 OR2T12Q8NG77 320 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 C10orf105Q8TEF2 133 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 LZICQ8WZA0 190 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 TNFRSF13CQ96RJ3 184 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 PIMREGQ9BSJ6 248 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 SEC61A2Q9H9S3 476 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 GLTPQ9NZD2 209 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 HIVEP2P31629 2446 aa16.45■□□□□ 0.22
CLN6-221ENST00000637494 A0A1W2PRG6 482 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 FAM220BPB1ANY3 271 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 BLOC1S5-TXNDC5H3BN57 136 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 NDUFS8O00217 210 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 OR5F1O95221 314 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 LYPD3O95274 346 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 FARS2O95363 451 aaKnown RBP16.44■□□□□ 0.22
CLN6-221ENST00000637494 BCL10O95999 233 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 HLA-HP01893 362 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 MT-ND1P03886 318 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 THY1P04216 161 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 PTDSS1P48651 473 aaKnown RBP16.44■□□□□ 0.22
CLN6-221ENST00000637494 PPOXP50336 477 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 PIGFQ07326 219 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 CARTPTQ16568 116 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 ZNF627Q7L945 461 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 PIWIL3Q7Z3Z3 882 aaKnown RBP16.44■□□□□ 0.22
CLN6-221ENST00000637494 SPATA21Q7Z572 469 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 ARPINQ7Z6K5 226 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 SLC25A44Q96H78 314 aaPredicted RBP16.44■□□□□ 0.22
CLN6-221ENST00000637494 ZNF583Q96ND8 569 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 ZNF426Q9BUY5 554 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 PLK3Q9H4B4 646 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 MED4Q9NPJ6 270 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 TAS2R5Q9NYW4 299 aa16.44■□□□□ 0.22
CLN6-221ENST00000637494 NSD1Q96L73 2696 aaPredicted RBP16.43■□□□□ 0.22
CLN6-221ENST00000637494 A8MV72 311 aaPredicted RBP16.43■□□□□ 0.22
CLN6-221ENST00000637494 MCIDASD6RGH6 385 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 hCG_2039718K7EN88 272 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 THRBP10828 461 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 USF1P22415 310 aaPredicted RBP16.43■□□□□ 0.22
CLN6-221ENST00000637494 THBS4P35443 961 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 CLRN1P58418 232 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 RAB1AP62820 205 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms