RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ARPC3O15145 178 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC31A1O15431 190 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RASGRP1O95267 797 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ATF1P18846 271 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FUT1P19526 365 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NFYAP23511 347 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IL32P24001 234 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 EIF2S3P41091 472 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 WASP42768 502 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 STARP49675 285 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CCR6P51684 374 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF136P52737 540 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 METAP1P53582 386 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MAZP56270 477 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR10A3P58181 314 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 VSX2P58304 361 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF85Q03923 595 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 EXOSC2Q13868 293 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GK2Q14410 553 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NFATC4Q14934 902 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 POU4F3Q15319 338 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 EMC4Q5J8M3 183 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FAM78AQ5JUQ0 283 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 HES5Q5TA89 166 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CHMP1BQ7LBR1 199 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC16A9Q7RTY1 509 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TAF8Q7Z7C8 310 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM17Q86X19 198 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GLB1L2Q8IW92 636 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 DNAAF1Q8NEP3 725 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SDR9C7Q8NEX9 313 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CADM4Q8NFZ8 388 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR5J2Q8NH18 312 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 KLHL15Q96M94 604 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ABHD1Q96SE0 405 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TIMP4Q99727 224 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MACROD1Q9BQ69 325 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MENTQ9BUN1 341 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 DUSP23Q9BVJ7 150 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TMPRSS13Q9BYE2 586 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NOX4Q9NPH5 578 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MBNL1Q9NR56 388 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PPP1R14DQ9NXH3 145 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MBD2Q9UBB5 411 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RAXQ9Y2V3 346 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FXYD6-FXYD2A0A087WZ82 144 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IGKV1-8A0A0C4DH67 115 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 KANTRA0A1W2PQU2 76 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MEGF11A6BM72 1044 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 H0YC42 278 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 BET1O15155 118 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PPM1DO15297 605 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SRPX2O60687 465 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NKX2-2O95096 273 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ALDOBP05062 364 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CEACAM5P06731 702 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 AKAIN1P0CW23 69 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 APEHP13798 732 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ATF4P18848 351 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 HOXC12P31275 282 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SRP9P49458 86 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CCR4P51679 360 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A1P53007 311 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ID2Q02363 134 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IKZF1Q13422 519 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RAB11BQ15907 218 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 AANATQ16613 207 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A35Q3KQZ1 300 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 Q5BKY6 102 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GLT8D1Q68CQ7 371 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 LAMTOR1Q6IAA8 161 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 APOOLQ6UXV4 268 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GLDNQ6ZMI3 551 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NLRC3Q7RTR2 1065 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR4N5Q8IXE1 308 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PM20D2Q8IYS1 436 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CMTM4Q8IZR5 234 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 UXS1Q8NBZ7 420 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR11H7Q8NGC8 314 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SCARB1Q8WTV0 552 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ASB17Q8WXJ9 295 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MIB2Q96AX9 1013 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ASB16Q96NS5 453 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR14A2Q96R54 314 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PRSS27Q9BQR3 290 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FXYD6Q9H0Q3 95 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC6A15Q9H2J7 730 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NANSQ9NR45 359 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SPHK1Q9NYA1 384 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 USP36Q9P275 1121 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GRHPRQ9UBQ7 328 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CYB5R1Q9UHQ9 305 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ST6GALNAC2Q9UJ37 374 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FBXL3Q9UKT7 428 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR6C74A6NCV1 312 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR14I1A6ND48 311 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SCDO00767 359 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A12O75746 678 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SCGNO76038 276 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 WDPCPO95876 746 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms