RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 TGP01266 2768 aa11□□□□□ -0.65
LINC00339-206ENST00000634451 TRAV36DV7A0A075B6V5 113 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 A0A0G2JPF8 293 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 VSTM5A8MXK1 200 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 HNRNPCL2B2RXH8 293 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 HNRNPCL3B7ZW38 293 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 SLCO1B7G3V0H7 640 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 HNRNPCL1O60812 293 aaKnown RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 PNPP00491 289 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 HNRNPCL4P0DMR1 293 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 NQO1P15559 274 aaKnown RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 HOXB9P17482 250 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 ARFIP2P53365 341 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 RAB1AP62820 205 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 RGNQ15493 299 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 TRMT5Q32P41 509 aaKnown RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 C6orf10Q5SRN2 563 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 NXNQ6DKJ4 435 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 MSRB3Q8IXL7 192 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 OR51F2Q8NH61 342 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 NFKBIDQ8NI38 313 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 SLC38A4Q969I6 547 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 SLC41A3Q96GZ6 507 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 OR52B2Q96RD2 323 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 FOXB1Q99853 325 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 PAIP2Q9BPZ3 127 aaKnown RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 ULBP2Q9BZM5 246 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 CALML5Q9NZT1 146 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 SLAMF8Q9P0V8 285 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 TAAR3PQ9P1P4 343 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 POFUT2Q9Y2G5 429 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 PCDHGB1Q9Y5G3 927 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 NOX1Q9Y5S8 564 aa10.99□□□□□ -0.65
LINC00339-206ENST00000634451 V9GYY5 206 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-206ENST00000634451 C11orf98E9PRG8 122 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 SLC22A3O75751 556 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 MPZL1O95297 269 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ANP32DO95626 131 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 TFP02787 698 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ZCCHC18P0CG32 403 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 PAX7P23759 505 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 EVX1P49640 407 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 WDR4P57081 412 aaKnown RBP10.98□□□□□ -0.65
LINC00339-206ENST00000634451 TXNL4AP83876 142 aaKnown RBP10.98□□□□□ -0.65
LINC00339-206ENST00000634451 PDCD4Q53EL6 469 aaKnown RBP10.98□□□□□ -0.65
LINC00339-206ENST00000634451 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ALG10BQ5I7T1 473 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 IL17RDQ8NFM7 739 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 OR6N1Q8NGY5 312 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ZBTB18Q99592 522 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
LINC00339-206ENST00000634451 BCL2L10Q9HD36 194 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 A4GALTQ9NPC4 353 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 RPS6KB2Q9UBS0 482 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 OPN4Q9UHM6 478 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 PPIAL4AQ9Y536 164 aa10.98□□□□□ -0.65
LINC00339-206ENST00000634451 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 LOC102725191A0A1B0GVB3 256 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 RAB36O95755 333 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 PCMT1P22061 227 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 AQP1P29972 269 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 BIDP55957 195 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 PMS2P3Q13401 168 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 MELKQ14680 651 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 NKPD1Q17RQ9 610 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 TSPYL5Q86VY4 417 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-206ENST00000634451 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 TMEM109Q9BVC6 243 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 CENPHQ9H3R5 247 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 IKZF5Q9H5V7 419 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 KCNK9Q9NPC2 374 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 DCAF16Q9NXF7 216 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 IFT52Q9Y366 437 aa10.97□□□□□ -0.65
LINC00339-206ENST00000634451 A0A0B4J2E0 115 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 A0A1B0GX12 115 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 CLIC1O00299 241 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 PLPP3O14495 311 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 HDAC3O15379 428 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 TMPRSS2O15393 492 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 RGS16O15492 202 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 OR2T1O43869 369 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 IL6P05231 212 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 MAKP20794 623 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 AHCYP23526 432 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms