RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SHBQ15464 509 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SPIN3Q5JUX0 258 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TUBA3EQ6PEY2 450 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF322Q6U7Q0 402 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MBOAT2Q6ZWT7 520 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 C9orf40Q8IXQ3 194 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PRR18Q8N4B5 295 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 CPEB3Q8NE35 698 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 GJC3Q8NFK1 279 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 STEAP2Q8NFT2 490 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SNTG1Q9NSN8 517 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 DDX28Q9NUL7 540 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ASH2LQ9UBL3 628 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MPDZO75970 2070 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 NTN3O00634 580 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 HLA-DPB1P04440 258 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ADRB1P08588 477 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 DCKP27707 260 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ACTA2P62736 377 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ACTG2P63267 376 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TSPAN31Q12999 210 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 DYNC1I2Q13409 638 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 CRMP1Q14194 572 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PGGHGQ32M88 737 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PGM2L1Q6PCE3 622 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MKXQ8IYA7 352 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 BOD1Q96IK1 185 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SLC38A1Q9H2H9 487 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SLCO5A1Q9H2Y9 848 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 CRNNQ9UBG3 495 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SLC5A6Q9Y289 635 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 WNK2Q9Y3S1 2297 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF462Q96JM2 2506 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SORBS2O94875 1100 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 LGI1O95970 557 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 RLN1P04808 185 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 CHMP24386 653 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 LIMK1P53667 647 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 FAM189A2Q15884 450 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ALKBH6Q3KRA9 238 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM171Q8WVE6 324 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ALG12Q9BV10 488 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MED20Q9H944 212 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 COMMD3Q9UBI1 195 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 EXOSC1Q9Y3B2 195 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM72A0PK05 275 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PIP5K1CO60331 668 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 GATBO75879 557 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 NADKO95544 446 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PAHP00439 452 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 COX6A1P12074 109 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 GABRR1P24046 479 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 TTKP33981 857 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PSMB10P40306 273 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 LGALS4P56470 323 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 RPL27P61353 136 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 RAE1P78406 368 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 BLMHQ13867 455 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ADPRMQ3LIE5 342 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PYDC2Q56P42 97 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 SLC35F2Q8IXU6 374 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 IL17RDQ8NFM7 739 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 CNIH3Q8TBE1 160 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 HSD17B8Q92506 261 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 THRSPQ92748 146 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 DNTTIP1Q9H147 329 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 NDUFA13Q9P0J0 144 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ERVK-18Q9QC07 812 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 C15orf41Q9Y2V0 281 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 C16orf97H3BN30 126 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 DHHO43323 396 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MAS1P04201 325 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 CBX3Q13185 183 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF718Q3SXZ3 478 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF441Q8N8Z8 693 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PIK3IP1Q96FE7 263 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MAELQ96JY0 434 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MUS81Q96NY9 551 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MND1Q9BWT6 205 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF700Q9H0M5 742 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF701Q9NV72 531 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 FBXL2Q9UKC9 423 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 WASF3Q9UPY6 502 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 A0A1W2PQ09 198 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM8BA6NDV4 472 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PFDN1O60925 122 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MAKP20794 623 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 MSR1P21757 451 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 TIAL1Q01085 375 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PLA2G2CQ5R387 149 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 DESI1Q6ICB0 168 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF704Q6ZNC4 412 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PAPD5Q8NDF8 572 aaKnown RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ST7LQ8TDW4 575 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms