RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PTTG3PQ9NZH4 202 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 XRCC2O43543 280 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CLDN11O75508 207 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TTRP02766 147 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CYS1Q717R9 158 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 LRRTM3Q86VH5 581 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OR5P2Q8WZ92 322 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TGM7Q96PF1 710 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CHST6Q9GZX3 395 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MYO7AQ13402 2215 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CSTBP04080 98 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 EPXP11678 715 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 OTX2P32243 289 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 FBXW12Q6X9E4 464 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF695Q8IW36 515 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TOE1Q96GM8 510 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TNFRSF13CQ96RJ3 184 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 N4BP2Q86UW6 1770 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MYH11P35749 1972 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MEIKINA0A087WXM9 373 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 NUDT19A8MXV4 375 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 SULT2B1O00204 365 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PMCHP20382 165 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 FCER1GP30273 86 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MIDNQ504T8 468 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ACOT7LQ6ZUV0 252 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MBOAT2Q6ZWT7 520 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MMP26Q9NRE1 261 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 STARD5Q9NSY2 213 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 UQCC1Q9NVA1 299 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MTCH1Q9NZJ7 389 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TRAPPC4Q9Y296 219 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RP1P56715 2156 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM218A2RU14 115 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 LRP5LA4QPB2 252 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RECKO95980 971 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 IQCF3P0C7M6 154 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 GLYATL3Q5SZD4 288 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF765Q7L2R6 523 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 RASD2Q96D21 266 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TPPP3Q9BW30 176 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 CDCA4Q9BXL8 241 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MCOLN1Q9GZU1 580 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 KLHL13Q9P2N7 655 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TAPBPO15533 448 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 APOBEC3FQ8IUX4 373 aaKnown RBP4.66□□□□□ -1.66
VPS13D-214ENST00000620676 TBC1D20Q96BZ9 403 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
VPS13D-214ENST00000620676 MBTPS2O43462 519 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 HNRNPA2B1P22626 353 aaKnown RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ELAVL4P26378 380 aaKnown RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PHYHD1Q5SRE7 291 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 OR5D18Q8NGL1 313 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 G6PC3Q9BUM1 346 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 SLC22A31A6NKX4 558 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 LDLRAD4O15165 306 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 SUSD5O60279 629 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 CXCL14O95715 111 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 OR4E1P0C645 316 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 DPP4P27487 766 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TAS2R19P59542 299 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MPPED2Q15777 294 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF792Q3KQV3 632 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TSTD1Q8NFU3 115 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM255BQ8WV15 326 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PCDHGA1Q9Y5H4 931 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 DCCP43146 1447 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MCRIP1C9JLW8 97 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PAPLNO95428 1278 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ATXN1LP0C7T5 689 aaKnown RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PAX6P26367 422 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ARRB1P49407 418 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 SIRPAP78324 504 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TAF1CQ15572 869 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 OPN3Q9H1Y3 402 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 BANF2Q9H503 90 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF442Q9H7R0 627 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 PLAC1Q9HBJ0 212 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 LPCAT3Q6P1A2 487 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM184AQ6ZMB5 413 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 OR51D1Q8NGF3 324 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 FAM71F1Q96KD3 344 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MYNNQ9NPC7 610 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 CBLN4Q9NTU7 201 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 MBPP02686 304 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ATP1B1P05026 303 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 CST2P09228 141 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 IMPA1P29218 277 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 FGF8P55075 233 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 ROBO4Q8WZ75 1007 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 FAM3DQ96BQ1 224 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 RBM18Q96H35 190 aaKnown RBP4.65□□□□□ -1.66
VPS13D-214ENST00000620676 NMNAT3Q96T66 252 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 P2RY12Q9H244 342 aa4.65□□□□□ -1.66
VPS13D-214ENST00000620676 DUSP22Q9NRW4 184 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms