RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 AKR7A3O95154 331 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ZFPL1O95159 310 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 OR6A2O95222 327 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 HLA-DOBP13765 273 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 UQCRC1P31930 480 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 P2RX1P51575 399 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 DCDP81605 110 aaKnown RBP11.23□□□□□ -0.61
CIITA-212ENST00000618207 MEP1BQ16820 701 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 CDONQ4KMG0 1287 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 HES5Q5TA89 166 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ARSKQ6UWY0 536 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 KMT5CQ86Y97 462 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 SLC38A6Q8IZM9 456 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 OR5M1Q8NGP8 315 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 EDAQ92838 391 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 DERL3Q96Q80 235 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 NKX3-1Q99801 234 aaPredicted RBP11.23□□□□□ -0.61
CIITA-212ENST00000618207 KLRF1Q9NZS2 232 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 LAMP5Q9UJQ1 280 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 PCDHGB2Q9Y5G2 931 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 MASP2O00187 686 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 XKRYO14609 159 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 ATF1P18846 271 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 TALDO1P37837 337 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 SLC6A8P48029 635 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 ACKR1Q16570 336 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 FIP1L1Q6UN15 594 aaKnown RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 KRT74Q7RTS7 529 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 MS4A15Q8N5U1 240 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 PLPP5Q8NEB5 264 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 SLC22A4Q9H015 551 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 BDP1A6H8Y1 2624 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 FADS1O60427 444 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 CRYZL1O95825 349 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 RENP00797 406 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 TFPIP10646 304 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 THBS2P35442 1172 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 RPS11P62280 158 aaKnown RBP eCLIP11.22□□□□□ -0.61
CIITA-212ENST00000618207 ZNF671Q8TAW3 534 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 IFI44Q8TCB0 444 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 AMELYQ99218 206 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 IER2Q9BTL4 223 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 C12orf10Q9HB07 376 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 SEMA5BQ9P283 1151 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 KCNG2Q9UJ96 466 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 A0A0G2JK05 382 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 MEIOCA2RUB1 952 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 EEF1E1O43324 174 aaKnown RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 LAMTOR5O43504 91 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 SLC16A7O60669 478 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 SC5DO75845 299 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 BGLAPP02818 100 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 ZNF28P17035 718 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 FOXK1P85037 733 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 GGTLC2Q14390 218 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 C1orf140Q5VVS0 124 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 AGAP6Q5VW22 663 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 CARFQ8N187 725 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 GCDHQ92947 438 aaPredicted RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 TXNDC15Q96J42 360 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 AGAP4Q96P64 663 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 GFM1Q96RP9 751 aaKnown RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 PTDSS2Q9BVG9 487 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
CIITA-212ENST00000618207 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
CIITA-212ENST00000618207 OGG1O15527 345 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 FLRT2O43155 660 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 OR2J2O76002 312 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 CELA2AP08217 269 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 OR7A5Q15622 319 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 HSD17B12Q53GQ0 312 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.61
CIITA-212ENST00000618207 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 PXKQ7Z7A4 578 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 SERPINA12Q8IW75 414 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 ZNF441Q8N8Z8 693 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 SETD6Q8TBK2 473 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 PPP1R14AQ96A00 147 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 ABHD1Q96SE0 405 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
CIITA-212ENST00000618207 FKRPQ9H9S5 495 aa11.21□□□□□ -0.61
CIITA-212ENST00000618207 MRM2Q9UI43 246 aaKnown RBP11.21□□□□□ -0.61
CIITA-212ENST00000618207 FAM240BA0A1B0GVZ2 78 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 IDH3BO43837 385 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 EIF4E2O60573 245 aaKnown RBP11.21□□□□□ -0.62
CIITA-212ENST00000618207 MPZL1O95297 269 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 CCL4P13236 92 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms