RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 NEUROG1Q92886 237 aa21.77■■□□□ 1.07
PMS1-220ENST00000618056 SAMD4AQ9UPU9 718 aaKnown RBP21.77■■□□□ 1.07
PMS1-220ENST00000618056 RNF13O43567 381 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 SMPD2O60906 423 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 PRSS23O95084 383 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 TSPAN19P0C672 248 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 ARF1P84077 181 aaKnown RBP21.76■■□□□ 1.07
PMS1-220ENST00000618056 TRAM2Q15035 370 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 PHYHD1Q5SRE7 291 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 CARD17Q5XLA6 110 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 FAM156AQ8NDB6 213 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 ZNF837Q96EG3 531 aaPredicted RBP21.76■■□□□ 1.07
PMS1-220ENST00000618056 CDRT15Q96T59 188 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 C1QTNF6Q9BXI9 259 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 B3GAT2Q9NPZ5 323 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 ENPP4Q9Y6X5 453 aa21.76■■□□□ 1.07
PMS1-220ENST00000618056 ZNF99A8MXY4 864 aaPredicted RBP21.75■■□□□ 1.07
PMS1-220ENST00000618056 BLOC1S5-TXNDC5H3BN57 136 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 M0R1B8 84 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 M0R3G1 203 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 DANCRP0C864 163 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 BIDP55957 195 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 RPL18Q07020 188 aaKnown RBP21.75■■□□□ 1.07
PMS1-220ENST00000618056 CAMK2DQ13557 499 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 TSEN54Q7Z6J9 526 aaKnown RBP21.75■■□□□ 1.07
PMS1-220ENST00000618056 TGIF2LYQ8IUE0 185 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 RBM15BQ8NDT2 890 aaKnown RBP21.75■■□□□ 1.07
PMS1-220ENST00000618056 TMEM171Q8WVE6 324 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 MOV10Q9HCE1 1003 aaKnown RBP21.75■■□□□ 1.07
PMS1-220ENST00000618056 MAGEL2Q9UJ55 1249 aa21.75■■□□□ 1.07
PMS1-220ENST00000618056 PAX1P15863 534 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 FUT4P22083 530 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 CDH11P55287 796 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 UBE2NP61088 152 aaKnown RBP21.74■■□□□ 1.07
PMS1-220ENST00000618056 ADAM8P78325 824 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 FOXD4Q12950 439 aaPredicted RBP21.74■■□□□ 1.07
PMS1-220ENST00000618056 ZNF627Q7L945 461 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 CYP4Z1Q86W10 505 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 DEFB107AQ8IZN7 70 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
PMS1-220ENST00000618056 OR6N1Q8NGY5 312 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 ACOT11Q8WXI4 607 aaPredicted RBP21.74■■□□□ 1.07
PMS1-220ENST00000618056 BPIFA2Q96DR5 249 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 ANKRD19PQ9H560 264 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 CISD1Q9NZ45 108 aaKnown RBP21.74■■□□□ 1.07
PMS1-220ENST00000618056 RHCGQ9UBD6 479 aa21.74■■□□□ 1.07
PMS1-220ENST00000618056 A0A096LPE4 126 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 A0A1W2PPZ6 126 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 PIP5K1CO60331 668 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 TCN1P20061 433 aaPredicted RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 NKX6-1P78426 367 aaPredicted RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 MXRA7P84157 204 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 KRTAP1-3Q8IUG1 177 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 RNF113BQ8IZP6 322 aaKnown RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 FAM169BQ8N8A8 192 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 SMAP2Q8WU79 429 aaPredicted RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 SLC25A44Q96H78 314 aaPredicted RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 GSX2Q9BZM3 304 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 CXorf56Q9H5V9 222 aa21.73■■□□□ 1.07
PMS1-220ENST00000618056 CRNNQ9UBG3 495 aaPredicted RBP21.73■■□□□ 1.07
PMS1-220ENST00000618056 CSNK1A1P48729 337 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 LSM11P83369 360 aaKnown RBP eCLIP21.72■■□□□ 1.07
PMS1-220ENST00000618056 SPOCK1Q08629 439 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 PGGHGQ32M88 737 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 C3orf36Q3SXR2 165 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 SHEQ5VZ18 495 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 SLC22A25Q6T423 547 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 NRMQ8IXM6 262 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 CCDC36Q8IYA8 594 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 DEPDC4Q8N2C3 294 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 TMEM54Q969K7 222 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 NSL1Q96IY1 281 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 C7orf34Q96L11 122 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 ULBP2Q9BZM5 246 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 ZNF701Q9NV72 531 aaPredicted RBP21.72■■□□□ 1.07
PMS1-220ENST00000618056 GLTPQ9NZD2 209 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 LAMP3Q9UQV4 416 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 HIF3AQ9Y2N7 669 aa21.72■■□□□ 1.07
PMS1-220ENST00000618056 BCL10O95999 233 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 SOD3P08294 240 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 IFI30P13284 250 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 AQP2P41181 271 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 PRKCDQ05655 676 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 FAM86B1Q8N7N1 296 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 ZNF566Q969W8 418 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 TMUB1Q9BVT8 246 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 GRIP2Q9C0E4 1043 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 NMNAT1Q9HAN9 279 aaPredicted RBP21.71■■□□□ 1.07
PMS1-220ENST00000618056 INIPQ9NRY2 104 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 NDUFAF4Q9P032 175 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 A0A087WUU8 490 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 A0A1W2PRG6 482 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 NPIPB13A6NJU9 1138 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 NPIPB4C9JG80 1138 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 ARHGEF9O43307 516 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 F13BP05160 661 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 PGA4P0DJD7 388 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 PGA3P0DJD8 388 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 RHCEP18577 417 aa21.71■■□□□ 1.07
PMS1-220ENST00000618056 RPS4XP62701 263 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms