RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RHBDD2Q6NTF9 364 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TMEM107Q6UX40 140 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CYHR1Q6ZMK1 362 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 C8orf46Q8TAG6 207 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SRRQ9GZT4 340 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 MRPS28Q9Y2Q9 187 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 DAPL1A0PJW8 107 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 M0R082 166 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 HTR3BO95264 441 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 RPL14P50914 215 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 FOXL1Q12952 345 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CDNFQ49AH0 187 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ZFP1Q6P2D0 407 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SLC16A12Q6ZSM3 486 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 OR52P1PQ8NH57 321 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TOMM40LQ969M1 308 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ADOQ96SZ5 270 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 EBPLQ9BY08 206 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TMEM225BP0DP42 221 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 RAP2AP10114 183 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 HLCSP50747 726 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 RAP2BP61225 183 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 PON3Q15166 354 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 MSMO1Q15800 293 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ADRM1Q16186 407 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CROCCP3Q8IVE0 287 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 STOML3Q8TAV4 291 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TRUB1Q8WWH5 349 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 WDR89Q96FK6 387 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 TRAPPC2LQ9UL33 140 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 PIKFYVEQ9Y2I7 2098 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ZNF17P17021 662 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MDH2P40926 338 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 PRKCIP41743 596 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 Q5PR19 223 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TMEM19Q96HH6 336 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 FOLH1BQ9HBA9 442 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CHRAC1Q9NRG0 131 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MTX2O75431 263 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TGFAP01135 160 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SPP1P10451 314 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PRKACBP22694 351 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SLC35A2P78381 396 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SLC25A3Q00325 362 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 EMX1Q04741 257 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 RSPRY1Q96DX4 576 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SPACA9Q96E40 222 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 SLC39A13Q96H72 371 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF419Q96HQ0 510 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 CPXM1Q96SM3 734 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CXXC4Q9H2H0 198 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 XKR8Q9H6D3 395 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CIDEBQ9UHD4 219 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 EML6Q6ZMW3 1958 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SGCEO43556 437 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CD97P48960 835 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 DPTQ07507 201 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CTBP1Q13363 440 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 GRK1Q15835 563 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TNFAIP8L3Q5GJ75 292 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR5M10Q6IEU7 315 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PIGCQ92535 297 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TLCD1Q96CP7 247 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TMEM56Q96MV1 263 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 A0A1W2PPM1 405 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 J3QRK9 145 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SAP18O00422 153 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 MT-ATP6P00846 226 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR10A3P58181 314 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 HNF4GQ14541 408 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 SHBQ15464 509 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TPRG1LQ5T0D9 272 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR13A1Q8NGR1 328 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OIT3Q8WWZ8 545 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CDKN2AIPNLQ96HQ2 116 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 COX4I2Q96KJ9 171 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CCDC32Q9BV29 185 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 MMP26Q9NRE1 261 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 IGHV1OR21-1A0A087WYE8 117 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 OR8G3PP0DMU2 310 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 STT3AP46977 705 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 POLR2JP52435 117 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 OSTM1Q86WC4 334 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 HOPXQ9BPY8 73 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 IGKV6D-21A0A0A0MT36 114 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TUBG1P23258 451 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 FUT7Q11130 342 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 GUCA2BQ16661 112 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TYSND1Q2T9J0 566 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 GALNT10Q86SR1 603 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 CPSF7Q8N684 471 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 SCGB1C1Q8TD33 95 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TXN2Q99757 166 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 EDA2RQ9HAV5 297 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 TUBG2Q9NRH3 451 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF716A6NP11 495 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 FRKP42685 505 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF83P51522 516 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NAAAQ02083 359 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 PMPCAQ10713 525 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms