RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MPGP29372 298 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 HOXC12P31275 282 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 GSSP48637 474 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 SH3BGRP55822 239 aaPredicted RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 CTXN1P60606 82 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 PPP1R8Q12972 351 aaKnown RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 TOP3AQ13472 1001 aaPredicted RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 CAMK2DQ13557 499 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 MELKQ14680 651 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 OR7E24Q6IFN5 339 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 HMBOX1Q6NT76 420 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 RPL13AP3Q6NVV1 102 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 SMARCD3Q6STE5 483 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 BHLHA15Q7RTS1 189 aaPredicted RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 AQP11Q8NBQ7 271 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ACBD4Q8NC06 268 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 OR10G2Q8NGC3 310 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 OR9Q2Q8NGE9 314 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 GIPC3Q8TF64 312 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ALKBH3Q96Q83 286 aaPredicted RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 POLDIP3Q9BY77 421 aaKnown RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ACTR6Q9GZN1 396 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 TXNIPQ9H3M7 391 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ZNF226Q9NYT6 803 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 KCNN3Q9UGI6 736 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ANKHD1Q8IWZ3 2542 aaKnown RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 COL12A1Q99715 3063 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 A6NIZ1 184 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 CENPBD1B2RD01 187 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 M0R3G1 203 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 PTP4A3O75365 173 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 UPK3AO75631 287 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 RAD51DO75771 328 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 IGHMP01871 453 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 SLC6A6P31641 620 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 CLRN1P58418 232 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 RAP1BP61224 184 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
MDC1-209ENST00000613547 RAP1AP62834 184 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
MDC1-209ENST00000613547 ATP6AP1Q15904 470 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 GPR139Q6DWJ6 353 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 IGFN1Q86VF2 1251 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 P2RY8Q86VZ1 359 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 C20orf196Q8IYI0 205 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 C17orf78Q8N4C9 275 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 ZNF433Q8N7K0 673 aaPredicted RBP11.69□□□□□ -0.54
MDC1-209ENST00000613547 OR52L1Q8NGH7 329 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 ASB10Q8WXI3 467 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 S100PBPQ96BU1 408 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 DGCR6LQ9BY27 220 aa11.69□□□□□ -0.54
MDC1-209ENST00000613547 PDP1Q9P0J1 537 aaPredicted RBP11.69□□□□□ -0.54
MDC1-209ENST00000613547 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
MDC1-209ENST00000613547 RPL36A-HNRNPH2H7BZ11 118 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 XKRYO14609 159 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ENTPD5O75356 428 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 GASTP01350 101 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 CD14P08571 375 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ITGA5P08648 1049 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 EPXP11678 715 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ACADSP16219 412 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 CDH2P19022 906 aaPredicted RBP11.68□□□□□ -0.54
MDC1-209ENST00000613547 CCKARP32238 428 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ACVR1BP36896 505 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 RPS6KA3P51812 740 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 IST1P53990 364 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ERVK-25P63136 954 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 COX10Q12887 443 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 FHL1Q13642 323 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 SNTB1Q13884 538 aaKnown RBP11.68□□□□□ -0.54
MDC1-209ENST00000613547 STK11Q15831 433 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 RFX4Q33E94 735 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 C9orf135Q5VTT2 229 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
MDC1-209ENST00000613547 KLHL24Q6TFL4 600 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 DPY19L2P2Q6ZN68 376 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 ARIH2OSQ8N7S6 290 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 LRRC75AQ8NAA5 344 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
MDC1-209ENST00000613547 NOXO1Q8NFA2 376 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 FNDC8Q8TC99 324 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 PYDC1Q8WXC3 89 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 HSD17B8Q92506 261 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 STMN2Q93045 179 aa11.68□□□□□ -0.54
MDC1-209ENST00000613547 GTPBP3Q969Y2 492 aaKnown RBP11.68□□□□□ -0.54
MDC1-209ENST00000613547 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms