RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 ARHGAP23Q9P227 1491 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 UGGT1Q9NYU2 1555 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 MAST1Q9Y2H9 1570 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TRBV9A0A0B4J1U6 114 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 IQANK1A0A1B0GTG1 560 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 KBTBD11-OT1A0A1B0GTJ5 212 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ZNF705EA8MWA4 302 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 A8MXQ7 604 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 E7ENQ6 273 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 SULT2B1O00204 365 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 RGS16O15492 202 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CHMP2AO43633 222 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 OR2J3O76001 311 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 C1orf105O95561 183 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 GNA14O95837 355 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CSTAP01040 98 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 PIGRP01833 764 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 MMP1P03956 469 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 P04436 131 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 FGF1P05230 155 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 RNH1P13489 461 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ZNF24P17028 368 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 GSTM3P21266 225 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CD9P21926 228 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 IL12AP29459 219 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 RRM2P31350 389 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 IFNA8P32881 189 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ACVR1BP36896 505 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LEPP41159 167 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 KPNA2P52292 529 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LIM2P55344 173 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 MRPS11P82912 194 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LIPEQ05469 1076 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 DMTNQ08495 405 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 SCRN3Q0VDG4 424 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 WDR43Q15061 677 aaKnown RBP eCLIP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TRIM16LQ309B1 348 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CARD16Q5EG05 197 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 BEX5Q5H9J7 111 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LIN9Q5TKA1 542 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 METTL11BQ5VVY1 283 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CGB2Q6NT52 195 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CCDC137Q6PK04 289 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LRRC31Q6UY01 552 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LRRC74BQ6ZQY2 392 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 VTCN1Q7Z7D3 282 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 LINC00523Q86TU6 105 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 C17orf82Q86X59 251 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 NUDCD3Q8IVD9 361 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 C9orf40Q8IXQ3 194 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CSNK1A1LQ8N752 337 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 OR52H1Q8NGJ2 320 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 OR9A1PQ8NGU1 263 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 PLPPR1Q8TBJ4 325 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TFB1MQ8WVM0 346 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 GTSF1Q8WW33 167 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 UFD1Q92890 307 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ZBED6CLQ96FA7 236 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ZBED3Q96IU2 234 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 OXGR1Q96P68 337 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CYP2S1Q96SQ9 504 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 FAIM2Q9BWQ8 316 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 DEFB126Q9BYW3 111 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 NEUROG2Q9H2A3 272 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CAB39LQ9H9S4 337 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TMEM165Q9HC07 324 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 NANSQ9NR45 359 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 PNO1Q9NRX1 252 aaKnown RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 IMPAD1Q9NX62 359 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 SPRR3Q9UBC9 169 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CLN8Q9UBY8 286 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 NAP1L2Q9ULW6 460 aaPredicted RBP2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 COPS3Q9UNS2 423 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 PDE10AQ9Y233 779 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CHD4Q14839 1912 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ARID1AO14497 2285 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 PREX2Q70Z35 1606 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 ADGBQ8N7X0 1667 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 TNRQ92752 1358 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 CEP350Q5VT06 3117 aa2.08□□□□□ -2.08
CCDC144B-206ENST00000609959 NCOA2Q15596 1464 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 SCAF11Q99590 1463 aaKnown RBP2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 SLIT1O75093 1534 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 PRDM15P57071 1507 aaPredicted RBP2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 ARHGAP5Q13017 1502 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 FAM135AQ9P2D6 1515 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 NACAE9PAV3 2078 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 KDM5AP29375 1690 aaKnown RBP2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 NSG1A0A0A6YYJ2 146 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 A0A1B0GUH1 482 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 LINC00854A0A1B0GVQ3 168 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 TCRBV9S1A1TA0A576 114 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 TRABD2BA6NFA1 517 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 ZNF879B4DU55 563 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 E9PLD3 99 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 GFYI3L273 518 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 NDUFAB1O14561 156 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 PSTPIP1O43586 416 aa2.07□□□□□ -2.08
CCDC144B-206ENST00000609959 HCN1O60741 890 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms