RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 NIPAL3Q6P499 406 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 DPY19L2P2Q6ZN68 376 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 AAED1Q7RTV5 226 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 FAM122BQ7Z309 247 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 LIX1LQ8IVB5 337 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TMEM123Q8N131 208 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 OR6K3Q8NGY3 331 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ZNF519Q8TB69 540 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ASB10Q8WXI3 467 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 RND1Q92730 232 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 Q96M85 177 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ZNF570Q96NI8 536 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ZFP3Q96NJ6 502 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ERMAPQ96PL5 475 aaPredicted RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 OR2M2Q96R28 347 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TSSK6Q9BXA6 273 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GABARAPL3Q9BY60 117 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 NDEL1Q9GZM8 345 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TXNIPQ9H3M7 391 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TOR3AQ9H497 397 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GP6Q9HCN6 339 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GLRX2Q9NS18 164 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GRHPRQ9UBQ7 328 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ZNF346Q9UL40 294 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 RNF6Q9Y252 685 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 NOSIPQ9Y314 301 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 EMC9Q9Y3B6 208 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ORC6Q9Y5N6 252 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 IER3IP1Q9Y5U9 82 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 NCOA6Q14686 2063 aaPredicted RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 TACC2O95359 2948 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 CENPEQ02224 2701 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 A0A1B0GUH1 482 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 NPIPB13A6NJU9 1138 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ZAR1LA6NP61 321 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 HSPB2A8KAH6 182 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 NPIPB4C9JG80 1138 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 H7C1C5 153 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 IMPA2O14732 288 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ZG16O60844 167 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 MRPL33O75394 65 aaKnown RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 SMNDC1O75940 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
MSH6-211ENST00000606499 ZNF432O94892 652 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SLC2A10O95528 541 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 BCL10O95999 233 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 CRHP06850 196 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 CTSSP25774 331 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SDHAP31040 664 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ACVR1BP36896 505 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 PTDSS1P48651 473 aaKnown RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 RPS6KA3P51812 740 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 CRISP1P54107 249 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 RAD23AP54725 363 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 LCN6P62502 163 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ESRRGP62508 458 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 CDK5Q00535 292 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 NPRL3Q12980 569 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 GINS1Q14691 196 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 PTGES3Q15185 160 aaKnown RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 HSPB2Q16082 182 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 PHYHD1Q5SRE7 291 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 TMEM211Q6ICI0 200 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ACSM5Q6NUN0 579 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SLC27A4Q6P1M0 643 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 TFAP2EQ6VUC0 442 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 PTCHD4Q6ZW05 846 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 BTLAQ7Z6A9 289 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 LNX2Q8N448 690 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 PACRGLQ8N7B6 248 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ARIH2OSQ8N7S6 290 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SYT14Q8NB59 555 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 RELL2Q8NC24 303 aaPredicted RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 SDR9C7Q8NEX9 313 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 OR2T33Q8NG76 320 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 TMEM45BQ96B21 275 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 APH1AQ96BI3 265 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 STARD4Q96DR4 205 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ALKBH3Q96Q83 286 aaPredicted RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 TACO1Q9BSH4 297 aaKnown RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 SFXN3Q9BWM7 321 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 OPN3Q9H1Y3 402 aaPredicted RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 FN3KQ9H479 309 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SLC25A19Q9HC21 320 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 SMPD3Q9NY59 655 aaPredicted RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 PRSS50Q9UI38 385 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 ERRFI1Q9UJM3 462 aaPredicted RBP6.8□□□□□ -1.32
MSH6-211ENST00000606499 RCE1Q9Y256 329 aa6.8□□□□□ -1.32
MSH6-211ENST00000606499 LRRK2Q5S007 2527 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ZNF726A6NNF4 738 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 EEF1E1-BLOC1S5C9J1V9 151 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 M0R3G1 203 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ARPC3O15145 178 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ARHGEF9O43307 516 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 EEF1E1O43324 174 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 AKAP8O43823 692 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLC43A1O75387 559 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 UPK3AO75631 287 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 TRMUO75648 421 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 TXNDC12O95881 172 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms