RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 ZNF347Q96SE7 839 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 TMEM5Q9Y2B1 443 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
TUBE1-211ENST00000605457 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
TUBE1-211ENST00000605457 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 EFCAB9A8MZ26 197 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CLOCKO15516 846 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 STAMBPO95630 424 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 LIMS1P48059 325 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 SLC9A3P48764 834 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 SMIM11AP58511 58 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CAMK2DQ13557 499 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 MELKQ14680 651 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 BEX5Q5H9J7 111 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 OAFQ86UD1 273 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CDC20BQ86Y33 519 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 C20orf196Q8IYI0 205 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 MUCL1Q96DR8 90 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 FAM46AQ96IP4 442 aaKnown RBP12.48□□□□□ -0.41
TUBE1-211ENST00000605457 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 TRIM15Q9C019 465 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 GPR35Q9HC97 309 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 INIPQ9NRY2 104 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 POMPQ9Y244 141 aa12.48□□□□□ -0.41
TUBE1-211ENST00000605457 CELSR1Q9NYQ6 3014 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 NPIPB13A6NJU9 1138 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 AQP12BA6NM10 295 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 ZNF726A6NNF4 738 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 NPIPB4C9JG80 1138 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 M0R3G1 203 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 BCL10O95999 233 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-211ENST00000605457 OMPP47874 163 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-211ENST00000605457 CHRNB3Q05901 458 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 FLOT2Q14254 428 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 FAM98BQ52LJ0 330 aaKnown RBP12.47□□□□□ -0.41
TUBE1-211ENST00000605457 ALG10Q5BKT4 473 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 ALKBH2Q6NS38 261 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 HMBOX1Q6NT76 420 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 AQP12AQ8IXF9 295 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 OR1K1Q8NGR3 316 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 OR52N5Q8NH56 324 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 OR51A7Q8NH64 312 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 ASB10Q8WXI3 467 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-211ENST00000605457 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-211ENST00000605457 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 NPAP1Q9NZP6 1156 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 SLC7A8Q9UHI5 535 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 SLC25A15Q9Y619 301 aa12.47□□□□□ -0.41
TUBE1-211ENST00000605457 A0A1W2PR80 420 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 RAP2AP10114 183 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 CSNK1A1P48729 337 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.41
TUBE1-211ENST00000605457 NR1H2P55055 460 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 ACKR1Q16570 336 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 ADGRG5Q8IZF4 528 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 WDR31Q8NA23 367 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 LRRC75AQ8NAA5 344 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 NRGNQ92686 78 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 PLPPR2Q96GM1 343 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 ALPK1Q96QP1 1244 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 TNFRSF13CQ96RJ3 184 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 NGBQ9NPG2 151 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 KRCC1Q9NPI7 259 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-211ENST00000605457 LYVE1Q9Y5Y7 322 aa12.46□□□□□ -0.41
TUBE1-211ENST00000605457 ARID1AO14497 2285 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF99A8MXY4 864 aaPredicted RBP12.45□□□□□ -0.42
TUBE1-211ENST00000605457 MCIDASD6RGH6 385 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 KRT36O76013 467 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 IGHMP01871 453 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF26P17031 533 aaPredicted RBP12.45□□□□□ -0.42
TUBE1-211ENST00000605457 HOXC12P31275 282 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 HMGA2P52926 109 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 PRPS1P60891 318 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 TBRG1Q3YBR2 411 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 ZBED5Q49AG3 693 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
TUBE1-211ENST00000605457 ARMC4Q5T2S8 1044 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms