RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ZNF83P51522 516 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 BIDP55957 195 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 ARF1P84077 181 aaKnown RBP13.76□□□□□ -0.21
RPS28-203ENST00000600659 PRKCDQ05655 676 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 RUNX1T1Q06455 604 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 KEAP1Q14145 624 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 C20orf204Q6ZNR8 217 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 ZNF627Q7L945 461 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 ACOT11Q8WXI4 607 aaPredicted RBP13.76□□□□□ -0.21
RPS28-203ENST00000600659 TMEM54Q969K7 222 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 BPIFA2Q96DR5 249 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 PYURFQ96I23 114 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 ALPK1Q96QP1 1244 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 SEPHS2Q99611 448 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 ANKRD19PQ9H560 264 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 NGBQ9NPG2 151 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 TAS2R1Q9NYW7 299 aa13.76□□□□□ -0.21
RPS28-203ENST00000600659 A0A096LPE4 126 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 A0A1W2PPZ6 126 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 A0A1W2PRQ8 180 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 TCRBV5S2A0A599 114 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 BLOC1S5-TXNDC5H3BN57 136 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 M0R3G1 203 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 CDC42EP2O14613 210 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ABCD4O14678 606 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 KRT33AO76009 404 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 SEC14L2O76054 403 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 F13BP05160 661 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 DANCRP0C864 163 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ZNF26P17031 533 aaPredicted RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 RHCEP18577 417 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 MNAT1P51948 309 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 TUBA1BP68363 451 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 TUBA4AP68366 448 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 MXRA7P84157 204 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 DGCR6Q14129 220 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 SEC23BQ15437 767 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 HIST3H3Q16695 136 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ZNF672Q499Z4 452 aaPredicted RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 ARMC4Q5T2S8 1044 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 C1QTNF12Q5T7M4 302 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 B3GLCTQ6Y288 498 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 MBOAT2Q6ZWT7 520 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 TUBA1AQ71U36 451 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 TRPM8Q7Z2W7 1104 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 GPR137CQ8N3F9 429 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ZNF611Q8N823 705 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ASB10Q8WXI3 467 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ADAD1Q96M93 576 aaKnown RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 NSMCE2Q96MF7 247 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 C1QTNF6Q9BXI9 259 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 MRPL13Q9BYD1 178 aaKnown RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 SEC61A2Q9H9S3 476 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 ZNF224Q9NZL3 707 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
RPS28-203ENST00000600659 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
RPS28-203ENST00000600659 TRBV4-1A0A0J9YWV2 114 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
RPS28-203ENST00000600659 CLOCKO15516 846 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 UBOX5O94941 541 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 OR6A2O95222 327 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 ACANP16112 2415 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 PTAFRP25105 342 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 LIMS1P48059 325 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 PRPS1P60891 318 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 MS4A2Q01362 244 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 LAPTM4AQ15012 233 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 ANKRD16Q6P6B7 361 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 LRFN4Q6PJG9 635 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 MYPOPQ86VE0 399 aaPredicted RBP13.74□□□□□ -0.21
RPS28-203ENST00000600659 RNF113BQ8IZP6 322 aaKnown RBP13.74□□□□□ -0.21
RPS28-203ENST00000600659 NMD3Q96D46 503 aaKnown RBP13.74□□□□□ -0.21
RPS28-203ENST00000600659 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 C1orf21Q9H246 121 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 NOX3Q9HBY0 568 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 OBP2BQ9NPH6 170 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 BEX4Q9NWD9 120 aaPredicted RBP13.74□□□□□ -0.21
RPS28-203ENST00000600659 ACTR3BQ9P1U1 418 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 RTTNQ86VV8 2226 aa13.74□□□□□ -0.21
RPS28-203ENST00000600659 MAP1AP78559 2803 aaPredicted RBP13.73□□□□□ -0.21
RPS28-203ENST00000600659 TRAV27A0A087WT01 109 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 HTR3EA5X5Y0 456 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 NPIPB13A6NJU9 1138 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 NPIPB4C9JG80 1138 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 M0R1B8 84 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 PDE5AO76074 875 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 IGKV3-15P01624 115 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 IGLV1-44P01699 117 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 H1F0P07305 194 aaKnown RBP13.73□□□□□ -0.21
RPS28-203ENST00000600659 SOD3P08294 240 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 IFNA8P32881 189 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 GPR4P46093 362 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 CSNK1A1P48729 337 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms