RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 OR6X1Q8NH79 312 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 MOSPD2Q8NHP6 518 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
UPF1-205ENST00000598209 MBD6Q96DN6 1003 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 ZNF837Q96EG3 531 aaPredicted RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 ADAD1Q96M93 576 aaKnown RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 NELFAQ9H3P2 528 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 B3GAT2Q9NPZ5 323 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 INIPQ9NRY2 104 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 A0A096LPE4 126 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 A0A1W2PPZ6 126 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 ABCD4O14678 606 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 HS3ST1O14792 307 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 PDE5AO76074 875 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 UBOX5O94941 541 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 BCL10O95999 233 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 ITGA2P17301 1181 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 MAKP20794 623 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 ATP6V1B2P21281 511 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 PTAFRP25105 342 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 LAPTM4AQ15012 233 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 TESK1Q15569 626 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 FGD3Q5JSP0 725 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 PODNL1Q6PEZ8 512 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 TMEM108Q6UXF1 575 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 CYP2R1Q6VVX0 501 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 LILRB1Q8NHL6 650 aaPredicted RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 SLC7A13Q8TCU3 470 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 MAGEE2Q8TD90 523 aaPredicted RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 NEUROG1Q92886 237 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 TMEM54Q969K7 222 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 MCUR1Q96AQ8 359 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 PIP5K1AQ99755 562 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 FOXC2Q99958 501 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 ULBP2Q9BZM5 246 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 C1orf21Q9H246 121 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 TAS2R1Q9NYW7 299 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 ACTR3BQ9P1U1 418 aa12.12□□□□□ -0.47
UPF1-205ENST00000598209 PRPF19Q9UMS4 504 aaKnown RBP12.12□□□□□ -0.47
UPF1-205ENST00000598209 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 A0A1W2PRQ8 180 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 ZNF99A8MXY4 864 aaPredicted RBP12.11□□□□□ -0.47
UPF1-205ENST00000598209 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 SEC14L2O76054 403 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 CD40P25942 277 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 GPR4P46093 362 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 DGCR6Q14129 220 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 IQCCQ4KMZ1 466 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 CDK20Q8IZL9 346 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
UPF1-205ENST00000598209 ZNF566Q969W8 418 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 SLC25A44Q96H78 314 aaPredicted RBP12.11□□□□□ -0.47
UPF1-205ENST00000598209 DHRS1Q96LJ7 313 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 CCL19Q99731 98 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 MUC13Q9H3R2 512 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
UPF1-205ENST00000598209 GLTPQ9NZD2 209 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 MGAT4BQ9UQ53 548 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 HIF3AQ9Y2N7 669 aa12.11□□□□□ -0.47
UPF1-205ENST00000598209 PLCE1Q9P212 2302 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 OTOGQ6ZRI0 2925 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TRAV27A0A087WT01 109 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TRBV4-1A0A0J9YWV2 114 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 SHISA9B4DS77 424 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 IGHG1P01857 330 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 FABP3P05413 133 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 PGA4P0DJD7 388 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 PGA3P0DJD8 388 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
UPF1-205ENST00000598209 SLC9A3P48764 834 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
UPF1-205ENST00000598209 RPS4XP62701 263 aaKnown RBP12.1□□□□□ -0.47
UPF1-205ENST00000598209 TUBA1BP68363 451 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TUBA4AP68366 448 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 SPIBQ01892 262 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 SPOCK1Q08629 439 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TRIM25Q14258 630 aaKnown RBP12.1□□□□□ -0.47
UPF1-205ENST00000598209 ZNF672Q499Z4 452 aaPredicted RBP12.1□□□□□ -0.47
UPF1-205ENST00000598209 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 MTX3Q5HYI7 312 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TMPRSS11FQ6ZWK6 438 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TUBA1AQ71U36 451 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 HDDC2Q7Z4H3 204 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 OAFQ86UD1 273 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 DHFR2Q86XF0 187 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms