RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SCARB2Q14108 478 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 MAD2L1BPQ15013 274 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 OR1Q1Q15612 314 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 GSG1Q2KHT4 349 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 NHLRC1Q6VVB1 395 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 LRP11Q86VZ4 500 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 ZNF786Q8N393 782 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 FGFBP3Q8TAT2 258 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 DNAJA4Q8WW22 397 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 MRPL24Q96A35 216 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 SLC41A3Q96GZ6 507 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 ANKRD27Q96NW4 1050 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 TCF7L2Q9NQB0 619 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 CCDC167Q9P0B6 97 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 PRDM4Q9UKN5 801 aa10.42□□□□□ -0.74
SOX2-OT-228ENST00000597828 LOC102725191A0A1B0GVB3 256 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 C11orf98E9PRG8 122 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 WNT9BO14905 357 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 POLR3GO15318 223 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 NCR1O76036 304 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 HPXP02790 462 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 OPN1SWP03999 348 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ZNF35P13682 527 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ITGA2P17301 1181 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 NR4A1P22736 598 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 MDH1P40925 334 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ALDH3B1P43353 468 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 CDH12P55289 794 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 STX1BP61266 288 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ELFN2Q5R3F8 820 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 FAM91A1Q658Y4 838 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 REEP3Q6NUK4 255 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ULK3Q6PHR2 472 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 BLOC1S3Q6QNY0 202 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 C5orf46Q6UWT4 87 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 WDR88Q6ZMY6 472 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 LINC01356Q8N9X3 169 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 SMYD1Q8NB12 490 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ZNF540Q8NDQ6 660 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 SLC47A1Q96FL8 570 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 ULBP2Q9BZM5 246 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 MOV10Q9HCE1 1003 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 CMAHPQ9Y471 501 aa10.41□□□□□ -0.74
SOX2-OT-228ENST00000597828 M0R233 179 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 TGDSO95455 350 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 ERCC1P07992 297 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 AHCYP23526 432 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 GIPRP48546 466 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 MRPL19P49406 292 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 IDH3AP50213 366 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 PUDPQ08623 228 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 SELPLGQ14242 412 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 SQLEQ14534 574 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 MELKQ14680 651 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 RAB39AQ14964 217 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 NPTX1Q15818 432 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 ALKBH6Q3KRA9 238 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 NET1Q7Z628 596 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 TSPYL5Q86VY4 417 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 KRT73Q86Y46 540 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 ZNF584Q8IVC4 421 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 C10orf53Q8N6V4 93 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 SCAIQ8N9R8 606 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 OR4D11Q8NGI4 311 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 OR6N1Q8NGY5 312 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 YIPF5Q969M3 257 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 FOXB1Q99853 325 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 CPPED1Q9BRF8 314 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 ASPNQ9BXN1 380 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 TMEM27Q9HBJ8 222 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 LPAR2Q9HBW0 351 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 MRPL39Q9NYK5 338 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 POFUT2Q9Y2G5 429 aa10.4□□□□□ -0.74
SOX2-OT-228ENST00000597828 CPSF4LA6NMK7 179 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 FAM157AC9JC47 383 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 PLPP3O14495 311 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 SYNGR3O43761 229 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 MFN2O95140 757 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 THY1P04216 161 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 ADORA3P0DMS8 318 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 NAT2P11245 290 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 COL8A2P25067 703 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 SRP14P37108 136 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 CSNK1A1P48729 337 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 BIDP55957 195 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 RAB1AP62820 205 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 GUCY1A3Q02108 690 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 FXNQ16595 210 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 TRMT5Q32P41 509 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 AGKQ53H12 422 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms