RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 LYVE1Q9Y5Y7 322 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 ABCA4P78363 2273 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 TCRBV3S1A0A5B6 114 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 M0R3G1 203 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 PDLIM1O00151 329 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 CDC42EP2O14613 210 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 TSPAN19P0C672 248 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 IFNGR2P38484 337 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 OMPP47874 163 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 CSNK1A1P48729 337 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 DAP3P51398 398 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 RPS4XP62701 263 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 ROR2Q01974 943 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 ZBED5Q49AG3 693 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 C1orf146Q5VVC0 180 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 C22orf34Q6ZV56 151 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 HDDC2Q7Z4H3 204 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 OR6X1Q8NH79 312 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 HSD17B8Q92506 261 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 MUCL1Q96DR8 90 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 CHID1Q9BWS9 393 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
SHKBP1-214ENST00000597396 CSMD1Q96PZ7 3565 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 HEATR1Q9H583 2144 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 GOSR1O95249 250 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 CST1P01037 141 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 THBDP07204 575 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 CRYGSP22914 178 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 HOXC12P31275 282 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 CTXN1P60606 82 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 PRPS1P60891 318 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 TAF11Q15544 211 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 TAB1Q15750 504 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 GABRA6Q16445 453 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 TIMM23BQ5SRD1 257 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 ASRGL1Q7L266 308 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 LINGO2Q7L985 606 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 C20orf196Q8IYI0 205 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 C1orf162Q8NEQ5 155 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 LRR1Q96L50 414 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 GPR35Q9HC97 309 aa17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 STX18Q9P2W9 335 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 SAMHD1Q9Y3Z3 626 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-214ENST00000597396 UNC119BA6NIH7 251 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 OR5H1A6NKK0 313 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 GNGT2O14610 69 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 RPL4P36578 427 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 LIMS1P48059 325 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 HMGA2P52926 109 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 SH3BGRP55822 239 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 PPP1R8Q12972 351 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 TOP3AQ13472 1001 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 PPA1Q15181 289 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 ACKR1Q16570 336 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 CEACAM16Q2WEN9 425 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 IGFN1Q86VF2 1251 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 P2RY8Q86VZ1 359 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 WDFY1Q8IWB7 410 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 LINC00471Q8N535 108 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 ASB10Q8WXI3 467 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 ZNF566Q969W8 418 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 SLC25A44Q96H78 314 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 ULBP2Q9BZM5 246 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 TXNIPQ9H3M7 391 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 CRLF2Q9HC73 371 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 NGBQ9NPG2 151 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 U3KQV3 271 aa17.28■□□□□ 0.36
SHKBP1-214ENST00000597396 NPIPB13A6NJU9 1138 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 NPIPB4C9JG80 1138 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 RPL36A-HNRNPH2H7BZ11 118 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 FKBP6O75344 327 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 CTAG2O75638 210 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 CCNB2O95067 398 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 IGHG1P01857 330 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 CLRN1P58418 232 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 FHL1Q13642 323 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 PHYHD1Q5SRE7 291 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 KLHL24Q6TFL4 600 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 SSX8Q7RTT4 187 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 ZER1Q7Z7L7 766 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 C17orf78Q8N4C9 275 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 OR4C15Q8NGM1 316 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 OR1K1Q8NGR3 316 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 OR52N5Q8NH56 324 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 GNPDA2Q8TDQ7 276 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 MUS81Q96NY9 551 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 POLDIP3Q9BY77 421 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 VNN3Q9NY84 501 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 SIGLEC7Q9Y286 467 aa17.27■□□□□ 0.36
SHKBP1-214ENST00000597396 NDUFB2O95178 105 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 ACADSP16219 412 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 RPL27P61353 136 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 BEX5Q5H9J7 111 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 PGBD2Q6P3X8 592 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 LRRC75AQ8NAA5 344 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 NOXO1Q8NFA2 376 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 OR9Q2Q8NGE9 314 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 TMEM54Q969K7 222 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 PIK3IP1Q96FE7 263 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms