RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CYP2R1Q6VVX0 501 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 TMPRSS11FQ6ZWK6 438 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 OAFQ86UD1 273 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 WDR31Q8NA23 367 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC7A13Q8TCU3 470 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 NRGNQ92686 78 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 BCL2L2Q92843 193 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 ZNF566Q969W8 418 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 ASB9Q96DX5 294 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 HS3ST6Q96QI5 342 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 TMEM204Q9BSN7 226 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 ULBP2Q9BZM5 246 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 TRIM15Q9C019 465 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 POFUT2Q9Y2G5 429 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 HIF3AQ9Y2N7 669 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 FREM1Q5H8C1 2179 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 NPIPB13A6NJU9 1138 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 CENPBD1B2RD01 187 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 NPIPB4C9JG80 1138 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 CLOCKO15516 846 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ENTPD5O75356 428 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ATP5HO75947 161 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 PDE5AO76074 875 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 GADD45GO95257 159 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 IGHG1P01857 330 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 F13BP05160 661 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 MAKP20794 623 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ARF1P84077 181 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 TRAP1Q12931 704 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 LAPTM4AQ15012 233 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 CEACAM16Q2WEN9 425 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 TBRG1Q3YBR2 411 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ALG10Q5BKT4 473 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 PODNL1Q6PEZ8 512 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 TBPL2Q6SJ96 375 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 C20orf204Q6ZNR8 217 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 LINGO2Q7L985 606 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 PIWIL3Q7Z3Z3 882 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ZDHHC21Q8IVQ6 265 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 DEPDC4Q8N2C3 294 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 BTBD10Q9BSF8 475 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 UBTD1Q9HAC8 227 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 GLTPQ9NZD2 209 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ITGB1BP2Q9UKP3 347 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 TMCC3Q9ULS5 477 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 AURKCQ9UQB9 309 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 PLEKHA6Q9Y2H5 1048 aa15.15■□□□□ 0.02
SHKBP1-212ENST00000596163 ARPC4-TTLL3A0A0A6YYG9 625 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 A0A1W2PPR1 153 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 A0A1W2PR80 420 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 DPRXA6NFQ7 191 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 ZNF99A8MXY4 864 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 KRT36O76013 467 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 DIRAS1O95057 198 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 NR2C1P13056 603 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 ATP6V1B2P21281 511 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 IFNGR2P38484 337 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 ZNF83P51522 516 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 CLRN1P58418 232 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 SPIBQ01892 262 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 CHRNB3Q05901 458 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 BSPH1Q075Z2 132 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 IQCCQ4KMZ1 466 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 HIKESHIQ53FT3 197 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 ADAM5Q6NVV9 412 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 OR52J3Q8NH60 311 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 MOSPD2Q8NHP6 518 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 TMEM54Q969K7 222 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 PIGTQ969N2 578 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 SEPHS2Q99611 448 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 TXNIPQ9H3M7 391 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 LIME1Q9H400 295 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 MAGIXQ9H6Y5 334 aa15.14■□□□□ 0.01
SHKBP1-212ENST00000596163 M0R1B8 84 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 HOXB6P17509 224 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 IST1P53990 364 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 LSM11P83369 360 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 MS4A2Q01362 244 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 BNIP1Q12981 228 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 MELKQ14680 651 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 ZBED5Q49AG3 693 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 FAM98BQ52LJ0 330 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 SEZ6L2Q6UXD5 910 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 OR4K5Q8NGD3 323 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 OR51A7Q8NH64 312 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 MBD6Q96DN6 1003 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 TNFRSF13CQ96RJ3 184 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 NPAP1Q9NZP6 1156 aa15.13■□□□□ 0.01
SHKBP1-212ENST00000596163 A0A096LPE4 126 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 TRBV4-1A0A0J9YWV2 114 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 A0A1W2PPZ6 126 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 TCRBV5S2A0A599 114 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 HS3ST1O14792 307 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 DNAJC8O75937 253 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 ATE1O95260 518 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 ACADSP16219 412 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 FUT4P22083 530 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 CD40P25942 277 aa15.12■□□□□ 0.01
SHKBP1-212ENST00000596163 CTXN1P60606 82 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms